RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 BMP8AQ7Z5Y6 402 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 TTC16Q8NEE8 873 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 SH3RF2Q8TEC5 729 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 STK32AQ8WU08 396 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 SPAG5Q96R06 1193 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 ULBP1Q9BZM6 244 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 MFSD1Q9H3U5 465 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 CYLDQ9NQC7 956 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 CNGB3Q9NQW8 809 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 CLIC5Q9NZA1 410 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 CA14Q9ULX7 337 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 CPQQ9Y646 472 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 GREB1Q4ZG55 1949 aa21.99■■□□□ 1.11
SEC13-217ENST00000482647 EPHB6O15197 1021 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 RARGP13631 454 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 LCP1P13796 627 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 SCD5Q86SK9 330 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 DDX42Q86XP3 938 aaKnown RBP eCLIP21.98■■□□□ 1.11
SEC13-217ENST00000482647 ZNF276Q8N554 614 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 SHDQ96IW2 340 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 NAP1L5Q96NT1 182 aaPredicted RBP21.98■■□□□ 1.11
SEC13-217ENST00000482647 CDK5RAP1Q96SZ6 601 aaKnown RBP21.98■■□□□ 1.11
SEC13-217ENST00000482647 NLRC4Q9NPP4 1024 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 ARHGEF3Q9NR81 526 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 OSER1Q9NX31 292 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 SMPD4Q9NXE4 827 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 PCDHGC3Q9UN70 934 aa21.98■■□□□ 1.11
SEC13-217ENST00000482647 LEFTY2O00292 366 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 CYP11B1P15538 503 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 ATP5C1P36542 298 aaKnown RBP21.97■■□□□ 1.11
SEC13-217ENST00000482647 STAT1P42224 750 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 JAM2P57087 298 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 YWHAGP61981 247 aaKnown RBP eCLIP21.97■■□□□ 1.11
SEC13-217ENST00000482647 FANCCQ00597 558 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 MTF1Q14872 753 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 NR1I3Q14994 352 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 ZNF77Q15935 545 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 KLHDC10Q6PID8 442 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 SCML4Q8N228 414 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 CSGALNACT1Q8TDX6 532 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 ZFYVE19Q96K21 471 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 LHX5Q9H2C1 402 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 ST7Q9NRC1 585 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 GKN1Q9NS71 199 aa21.97■■□□□ 1.11
SEC13-217ENST00000482647 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.97■■□□□ 1.11
SEC13-217ENST00000482647 KRBA1A5PL33 1030 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 ARNTLO00327 626 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 FBXO21O94952 628 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 TBX18O95935 607 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 SOX5P35711 763 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 ACADSBP45954 432 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 RPL34P49207 117 aaKnown RBP21.96■■□□□ 1.11
SEC13-217ENST00000482647 PRKCQQ04759 706 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 PDGFRLQ15198 375 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 C10orf120Q5SQS8 335 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 HFE2Q6ZVN8 426 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 KIAA1958Q8N8K9 716 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 IRGQQ8WZA9 623 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 FAM83CQ9BQN1 747 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 PDCL3Q9H2J4 239 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 DNMT3LQ9UJW3 386 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 CEP83Q9Y592 693 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 TECTAO75443 2155 aa21.96■■□□□ 1.11
SEC13-217ENST00000482647 A0A1W2PQC6 194 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 PIK3R2O00459 728 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 STK25O00506 426 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 GABBR2O75899 941 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 GFPT2O94808 682 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 ZXDBP98169 803 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 USP4Q13107 963 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 MLF2Q15773 248 aaPredicted RBP21.95■■□□□ 1.1
SEC13-217ENST00000482647 BTBD8Q5XKL5 378 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 CACNA2D4Q7Z3S7 1137 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 RIN3Q8TB24 985 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 NDRG1Q92597 394 aaKnown RBP21.95■■□□□ 1.1
SEC13-217ENST00000482647 NOX5Q96PH1 765 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 LRFN3Q9BTN0 628 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 SLC4A5Q9BY07 1137 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 DUS2Q9NX74 493 aaKnown RBP21.95■■□□□ 1.1
SEC13-217ENST00000482647 CFAP97Q9P2B7 532 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 MYH10P35580 1976 aa21.95■■□□□ 1.1
SEC13-217ENST00000482647 GLULP15104 373 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 MLLT6P55198 1093 aaPredicted RBP21.94■■□□□ 1.1
SEC13-217ENST00000482647 UBASH3AP57075 661 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 STARD6P59095 220 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 DAOAP59103 153 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 ZNF445P59923 1031 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 GOLGA8FQ08AF8 430 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 GOLGA8DPQ0D2H9 430 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 IER5LQ5T953 404 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 BSPRYQ5W0U4 402 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 RSRC2Q7L4I2 434 aaKnown RBP21.94■■□□□ 1.1
SEC13-217ENST00000482647 TMEM110Q86TL2 294 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 PASD1Q8IV76 773 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 SCUBE3Q8IX30 993 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 FBXL6Q8N531 539 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 WDTC1Q8N5D0 677 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 OSCP1Q8WVF1 389 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 GOLGA1Q92805 767 aa21.94■■□□□ 1.1
SEC13-217ENST00000482647 MIS12Q9H081 205 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms