RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ABCA5Q8WWZ7 1642 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 TTC28Q96AY4 2481 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 TRIM43BA6NCK2 446 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 FOXN3O00409 490 aaPredicted RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 PDHA1P08559 390 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 PHKG2P15735 406 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 NDUFB7P17568 137 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 LRPAP1P30533 357 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 FOXF2Q12947 444 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 BMPR2Q13873 1038 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 NOL8Q76FK4 1167 aaKnown RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 ZNF551Q7Z340 670 aaPredicted RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 SLC15A3Q8IY34 581 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 SRRM1Q8IYB3 904 aaKnown RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.44□□□□□ -1.7
COPA-204ENST00000481522 PJA1Q8NG27 643 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 MAML1Q92585 1016 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 TRIM43Q96BQ3 446 aaPredicted RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 NMD3Q96D46 503 aaKnown RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 HAPLN3Q96S86 360 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 APOL5Q9BWW9 433 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 KRTAP4-3Q9BYR4 195 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 MS4A7Q9GZW8 240 aaPredicted RBP4.44□□□□□ -1.7
COPA-204ENST00000481522 SEMA4GQ9NTN9 838 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 ST3GAL5Q9UNP4 418 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 SNX13Q9Y5W8 968 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 ZMYM4Q5VZL5 1548 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 ZNF462Q96JM2 2506 aa4.44□□□□□ -1.7
COPA-204ENST00000481522 FLNBO75369 2602 aaKnown RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 SLIT2O94813 1529 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 FAM135AQ9P2D6 1515 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 MBD3L4A6NDZ8 208 aaPredicted RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 MBD3L3A6NE82 208 aaPredicted RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 RHPN2P1A8MT19 583 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 SLC16A3O15427 465 aaKnown RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 IGLV2-14P01704 120 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 NBPF7P0C2Y1 421 aaPredicted RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 KLRC1P26715 233 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 ALDH9A1P49189 494 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 CCT8P50990 548 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 CLCN2P51788 898 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 C3orf38Q5JPI3 329 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 DCAF12L1Q5VU92 463 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 C11orf96Q7Z7L8 435 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 SESTD1Q86VW0 696 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 MICU3Q86XE3 530 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 GAS2L3Q86XJ1 694 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 ATG4AQ8WYN0 398 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 RAPGEF4Q8WZA2 1011 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 PHKBQ93100 1093 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 RFKQ969G6 155 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 SARAFQ96BY9 339 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 MSLNLQ96KJ4 702 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 TIMP4Q99727 224 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 MESP1Q9BRJ9 268 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 UNKQ9C0B0 810 aaKnown RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 ARNT2Q9HBZ2 717 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 GLOD4Q9HC38 313 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 ALG13Q9NP73 1137 aaKnown RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 PNPLA8Q9NP80 782 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 SERHLQ9NQF3 203 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 DKK3Q9UBP4 350 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 NDRG4Q9ULP0 352 aaKnown RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 WNT6Q9Y6F9 365 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 BRCA2P51587 3418 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 NPHP4O75161 1426 aaPredicted RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 NPATQ14207 1427 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 CHD6Q8TD26 2715 aa4.43□□□□□ -1.7
COPA-204ENST00000481522 COL3A1P02461 1466 aaPredicted RBP4.43□□□□□ -1.7
COPA-204ENST00000481522 ANO9A1A5B4 782 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 TMEM233B4DJY2 109 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PYCARD-AS1I3L0S3 204 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 APAF1O14727 1248 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PMM2O15305 246 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PLIN1O60240 522 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 RASSF9O75901 435 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 WT1P19544 449 aaPredicted RBP4.42□□□□□ -1.7
COPA-204ENST00000481522 DRD4P21917 467 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PDE6CP51160 858 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PRKAG1P54619 331 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 RPS16P62249 146 aaKnown RBP4.42□□□□□ -1.7
COPA-204ENST00000481522 MYO1EQ12965 1108 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 AMIGO2Q86SJ2 522 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 DTX2Q86UW9 622 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 RASAL3Q86YV0 1011 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 OR56A3Q8NH54 315 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 ZNF384Q8TF68 577 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 SPSB4Q96A44 273 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 PPP1R9BQ96SB3 815 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 STRBPQ96SI9 672 aaKnown RBP4.42□□□□□ -1.7
COPA-204ENST00000481522 COL20A1Q9P218 1284 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 CORO2BQ9UQ03 480 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 SH2B3Q9UQQ2 575 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 FGD5Q6ZNL6 1462 aa4.42□□□□□ -1.7
COPA-204ENST00000481522 TET3O43151 1660 aa4.41□□□□□ -1.7
COPA-204ENST00000481522 UACAQ9BZF9 1416 aa4.41□□□□□ -1.7
COPA-204ENST00000481522 ZNF318Q5VUA4 2279 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms