RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	DGKK	Q5KSL6	1271 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	C1orf228	Q6PIY5	440 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	SCD5	Q86SK9	330 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	ADGRG2	Q8IZP9	1017 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	MLKL	Q8NB16	471 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	UBA3	Q8TBC4	463 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	GPT2	Q8TD30	523 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	TFAP2B	Q92481	460 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	NDRG1	Q92597	394 aa	Known RBP	13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	P2RY13	Q9BPV8	354 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	INTS2	Q9H0H0	1204 aa	Known RBP	13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	PNPLA8	Q9NP80	782 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	PRMT8	Q9NR22	394 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	TSPAN16	Q9UKR8	245 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	FBXO4	Q9UKT5	387 aa		13.57	□□□□□ -0.24
ABCF3-215	ENST00000481116	PRR23A	A6NEV1	266 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	ANTXRL	A6NF34	631 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	P4HA2	O15460	535 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	NFATC1	O95644	943 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	FGFR1OP	O95684	399 aa	Known RBP	13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	RARG	P13631	454 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	TUB	P50607	506 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	APBA1	Q02410	837 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	PDE4C	Q08493	712 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	CETN1	Q12798	172 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	GAB4	Q2WGN9	574 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	GJB7	Q6PEY0	223 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	PIGZ	Q86VD9	579 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	ANKRD52	Q8NB46	1076 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	EZH1	Q92800	747 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	CD101	Q93033	1021 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	NKD2	Q969F2	451 aa	Predicted RBP	13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	KREMEN1	Q96MU8	473 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	IPO9	Q96P70	1041 aa	Known RBP	13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	ZSWIM1	Q9BR11	485 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	CRACR2A	Q9BSW2	395 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	NACA2	Q9H009	215 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	NAGPA	Q9UK23	515 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	SH3BP1	Q9Y3L3	701 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	USP3	Q9Y6I4	520 aa		13.56	□□□□□ -0.24
ABCF3-215	ENST00000481116	VDR	P11473	427 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	TDGF1	P13385	188 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	SLC9A1	P19634	815 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	BRD2	P25440	801 aa	Known RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	OPRD1	P41143	372 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	CXCL12	P48061	93 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	SLC6A11	P48066	632 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	DMWD	Q09019	674 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	NR1H3	Q13133	447 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	DHCR24	Q15392	516 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	TPD52L1	Q16890	204 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	ZNF528	Q3MIS6	628 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	RAB41	Q5JT25	222 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	RHBDF2	Q6PJF5	856 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	CCDC186	Q7Z3E2	898 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	BBS7	Q8IWZ6	715 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	SPEM1	Q8N4L4	309 aa		13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	KLF16	Q9BXK1	252 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	MYO18A	Q92614	2054 aa	Known RBP	13.55	□□□□□ -0.24
ABCF3-215	ENST00000481116	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	E2F8	A0AVK6	867 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116		O00370	1275 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	PIK3R2	O00459	728 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	XPO1	O14980	1071 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	RNF40	O75150	1001 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	ATP5C1	P36542	298 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	MTIF2	P46199	727 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	CCR3	P51677	355 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	TKTL1	P51854	596 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	BCAT1	P54687	386 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	AMPD2	Q01433	879 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	MESP2	Q0VG99	397 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	BST2	Q10589	180 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	C10orf120	Q5SQS8	335 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	LY6G5C	Q5SRR4	150 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	HEATR6	Q6AI08	1181 aa	Known RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	C12orf40	Q86WS4	652 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	SFTPA1	Q8IWL2	248 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	GBP4	Q96PP9	640 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	ULBP1	Q9BZM6	244 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	UBXN6	Q9BZV1	441 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	CYLD	Q9NQC7	956 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	HESX1	Q9UBX0	185 aa		13.54	□□□□□ -0.24
ABCF3-215	ENST00000481116	RALGAPA1	Q6GYQ0	2036 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116		K7ESF4	209 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	SLC9A3R1	O14745	358 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	GREM1	O60565	184 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	GABBR2	O75899	941 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	PAEP	P09466	180 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	LCP1	P13796	627 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	DRD1	P21728	446 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	RGS7	P49802	495 aa		13.53	□□□□□ -0.24
ABCF3-215	ENST00000481116	SLC8A3	P57103	927 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms