RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 UNC93AQ86WB7 457 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 MDM1Q8TC05 714 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 TSPAN18Q96SJ8 248 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 LPIN3Q9BQK8 851 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 GOLGA2P5Q9HBQ8 144 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 FAM49BQ9NUQ9 324 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 SLC12A4Q9UP95 1085 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 CFAP73A6NFT4 308 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 FGFR1P11362 822 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 EIF3BP55884 814 aaKnown RBP17.54■□□□□ 0.4
SH3D21-203ENST00000480549 PPP2R2AP63151 447 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 ACAP1Q15027 740 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 UPF3AQ9H1J1 476 aaKnown RBP17.54■□□□□ 0.4
SH3D21-203ENST00000480549 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
SH3D21-203ENST00000480549 C2CD4BA6NLJ0 364 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 CREB3O43889 395 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 ZNF143P52747 638 aaPredicted RBP17.53■□□□□ 0.4
SH3D21-203ENST00000480549 ITGA8P53708 1063 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 CXCL17Q6UXB2 119 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 ARMCX6Q7L4S7 300 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 LIMS2Q7Z4I7 341 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 SLC35F5Q8WV83 523 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 WNT8BQ93098 351 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 YIPF2Q9BWQ6 316 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 KPNA7A9QM74 516 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 GABBR2O75899 941 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 PGK1P00558 417 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 ATF2P15336 505 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 MIPP30301 263 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 CHKAP35790 457 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 PSMC4P43686 418 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 RGS7P49802 495 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
SH3D21-203ENST00000480549 SLC29A2Q14542 456 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 HADHQ16836 314 aaKnown RBP17.53■□□□□ 0.4
SH3D21-203ENST00000480549 AGBL2Q5U5Z8 902 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 ARHGAP17Q68EM7 881 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 PRUNE1Q86TP1 453 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 TEX9Q8N6V9 391 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 OR6B3Q8NGW1 331 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
SH3D21-203ENST00000480549 DCDC2CA8MYV0 355 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 KDELR1P24390 212 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 FCGRTP55899 365 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 OASLQ15646 514 aaKnown RBP17.52■□□□□ 0.4
SH3D21-203ENST00000480549 DENND2CQ68D51 928 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 OR6B2Q6IFH4 312 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
SH3D21-203ENST00000480549 PRDM16Q9HAZ2 1276 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 CDY2AQ9Y6F7 541 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 RIPK2O43353 540 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 GPD1P21695 349 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 ADCY8P40145 1251 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 VPS41P49754 854 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 TAF5Q15542 800 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 ZNF618Q5T7W0 954 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 SH3PXD2AQ5TCZ1 1133 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 TMEM154Q6P9G4 183 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 OLFML1Q6UWY5 402 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 CYP4V2Q6ZWL3 525 aaPredicted RBP17.52■□□□□ 0.4
SH3D21-203ENST00000480549 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 CCDC89Q8N998 374 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 GLIS1Q8NBF1 620 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 ZNF560Q96MR9 790 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 PEBP4Q96S96 227 aa17.52■□□□□ 0.4
SH3D21-203ENST00000480549 PTGESO14684 152 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 TRUB2O95900 331 aaKnown RBP17.52■□□□□ 0.39
SH3D21-203ENST00000480549 CD48P09326 243 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 NKX3-2P78367 333 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 TRIM32Q13049 653 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 RAB6CQ53S08 254 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 ZNF365Q70YC5 407 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 TMEM110Q86TL2 294 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 LMNTD2Q8IXW0 634 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 CMASQ8NFW8 434 aaPredicted RBP17.52■□□□□ 0.39
SH3D21-203ENST00000480549 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 CHMP6Q96FZ7 201 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 TRAIPQ9BWF2 469 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 MIS12Q9H081 205 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 RAB6CQ9H0N0 254 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 OCEL1Q9H607 264 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 PCSK1NQ9UHG2 260 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 USP18Q9UMW8 372 aa17.52■□□□□ 0.39
SH3D21-203ENST00000480549 CASP8AP2Q9UKL3 1982 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 A8MXQ7 604 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SH3D21-203ENST00000480549 GSTA1P08263 222 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 ALADP13716 330 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 LMO2P25791 158 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 PNPLA4P41247 253 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 FLT3LGP49771 235 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 MAGOHP61326 146 aaKnown RBP17.51■□□□□ 0.39
SH3D21-203ENST00000480549 KRT71Q3SY84 523 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 TWF2Q6IBS0 349 aaKnown RBP17.51■□□□□ 0.39
SH3D21-203ENST00000480549 LONP2Q86WA8 852 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 ALLCQ8N6M5 410 aa17.51■□□□□ 0.39
SH3D21-203ENST00000480549 KHSRPQ92945 711 aaKnown RBP eCLIP17.51■□□□□ 0.392e-10■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms