RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 KLK10O43240 276 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 PTP4A3O75365 173 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CER1O95813 267 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 TFRCP02786 760 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CYP1A1P04798 512 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 STAT1P42224 750 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 MCTP2Q6DN12 878 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CCDC129Q6ZRS4 1044 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 H1FNTQ75WM6 255 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 ZFP28Q8NHY6 868 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CREB3L4Q8TEY5 395 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 WDR60Q8WVS4 1066 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 CPT1BQ92523 772 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 TRIB1Q96RU8 372 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 SMOQ99835 787 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 TCF25Q9BQ70 676 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 TRIM5Q9C035 493 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 USP44Q9H0E7 712 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 PCMTD2Q9NV79 361 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 DNAJB11Q9UBS4 358 aa8.23□□□□□ -1.09
GAPVD1-217ENST00000479511 ZCCHC11Q5TAX3 1644 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 AKR1B1P15121 316 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 TGM1P22735 817 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 GALNSP34059 522 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 NPTX2P47972 431 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 GCLCP48506 637 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 BAK1Q16611 211 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 MFSD5Q6N075 450 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 MPZL3Q6UWV2 235 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 DOK3Q7L591 496 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 TXNDC5Q8NBS9 432 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 STAMQ92783 540 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 NELL1Q92832 810 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 MBD6Q96DN6 1003 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 MARS2Q96GW9 593 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 ZBTB45Q96K62 511 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 NSUN3Q9H649 340 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 RMI1Q9H9A7 625 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 IL21RQ9HBE5 538 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 GBA2Q9HCG7 927 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 NOL7Q9UMY1 257 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 RAD54BQ9Y620 910 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 FER1L4A9Z1Z3 1794 aa8.22□□□□□ -1.09
GAPVD1-217ENST00000479511 DRGXA6NNA5 263 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 EFCAB8A8MWE9 144 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 ADM5C9JUS6 153 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 CPA1P15085 419 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 LRPAP1P30533 357 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 HOXD13P35453 343 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 PXNP49023 591 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 CTXN3Q4LDR2 81 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 ZNF484Q5JVG2 852 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 SNX30Q5VWJ9 437 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 PRR23BQ6ZRT6 265 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 TMTC3Q6ZXV5 915 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 USP38Q8NB14 1042 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 ABHD5Q8WTS1 349 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 HMGB4Q8WW32 186 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 KCNN1Q92952 543 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 PHACTR3Q96KR7 559 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 ZNF512Q96ME7 567 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 EPB41L4BQ9H329 900 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 UNKLQ9H9P5 680 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 SPON1Q9HCB6 807 aa8.21□□□□□ -1.1
GAPVD1-217ENST00000479511 A0A1W2PRX2 142 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 KIAA0355O15063 1070 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 HK1P19367 917 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 CHMP24386 653 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 ACTN2P35609 894 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 CHN2P52757 468 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 PRKAG1P54619 331 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 LOXL3P58215 753 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 SF3A3Q12874 501 aaKnown RBP eCLIP8.2□□□□□ -1.11e-7■■■■□ 19.8
GAPVD1-217ENST00000479511 ANO7Q6IWH7 933 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 EFCAB12Q6NXP0 572 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 LAYNQ6UX15 382 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 CBLL1Q75N03 491 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 RALYLQ86SE5 291 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 ANKRD23Q86SG2 305 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 GPR135Q8IZ08 494 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 SHCBP1Q8NEM2 672 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 POC1BQ8TC44 478 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 TMEM171Q8WVE6 324 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 KTI12Q96EK9 354 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 ZDHHC12Q96GR4 267 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 TTPALQ9BTX7 342 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 AP1M1Q9BXS5 423 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 CCDC68Q9H2F9 335 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 PLSCR4Q9NRQ2 329 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 HAUS2Q9NVX0 235 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 NAALADL1Q9UQQ1 740 aa8.2□□□□□ -1.1
GAPVD1-217ENST00000479511 KIAA0556O60303 1618 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 SCO2A0A1W2PP80 73 aa8.19□□□□□ -1.1
GAPVD1-217ENST00000479511 CCDC78A2IDD5 438 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms