RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PRKCQQ04759 706 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 USP4Q13107 963 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 MTF1Q14872 753 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 MLF2Q15773 248 aaPredicted RBP21.54■■□□□ 1.04
VARS-224ENST00000479051 SLC44A4Q53GD3 710 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 SUGP1Q8IWZ8 645 aaKnown RBP21.54■■□□□ 1.04
VARS-224ENST00000479051 ULBP1Q9BZM6 244 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 RNF38Q9H0F5 515 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 CCSER2Q9H7U1 834 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 ACP6Q9NPH0 428 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
VARS-224ENST00000479051 CYLDQ9NQC7 956 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 CNGB3Q9NQW8 809 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 CLIC5Q9NZA1 410 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 CEP83Q9Y592 693 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 TECTAO75443 2155 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 F8VZ95 297 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 STK25O00506 426 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 FBXO21O94952 628 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 PNMA6AP0CW24 399 aaPredicted RBP21.53■■□□□ 1.04
VARS-224ENST00000479051 RARGP13631 454 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 LCP1P13796 627 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 ATP5C1P36542 298 aaKnown RBP21.53■■□□□ 1.04
VARS-224ENST00000479051 ACADSBP45954 432 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 RGS7P49802 495 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 GOLGA8FQ08AF8 430 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 GOLGA8DPQ0D2H9 430 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 ZNF77Q15935 545 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 PM20D1Q6GTS8 502 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 PMF1Q6P1K2 205 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 DENND1BQ6P3S1 775 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 LRSAM1Q6UWE0 723 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 KIAA1958Q8N8K9 716 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 STK32AQ8WU08 396 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 LRRC3BQ96PB8 259 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 NOX5Q96PH1 765 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 PDCL3Q9H2J4 239 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 ST7Q9NRC1 585 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 SMPD4Q9NXE4 827 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 PCDHGC3Q9UN70 934 aa21.53■■□□□ 1.04
VARS-224ENST00000479051 LEFTY2O00292 366 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 CLCN1P35523 988 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 GPD2P43304 727 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 IFNAR2P48551 515 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 YWHAGP61981 247 aaKnown RBP eCLIP21.52■■□□□ 1.04
VARS-224ENST00000479051 PDGFRLQ15198 375 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 HFE2Q6ZVN8 426 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 CACNA2D4Q7Z3S7 1137 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 SLC47A2Q86VL8 602 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 SCML4Q8N228 414 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 FBXL6Q8N531 539 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 ZNF276Q8N554 614 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 GOLGA1Q92805 767 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 MSANTD3Q96H12 275 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 LRFN3Q9BTN0 628 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 NMUR1Q9HB89 426 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 NLRC4Q9NPP4 1024 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 GKN1Q9NS71 199 aa21.52■■□□□ 1.04
VARS-224ENST00000479051 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.52■■□□□ 1.04
VARS-224ENST00000479051 A0A1B0GTH6 734 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 KRBA1A5PL33 1030 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 SART1O43290 800 aaKnown RBP21.51■■□□□ 1.03
VARS-224ENST00000479051 GLULP15104 373 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 STAT1P42224 750 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 SNX16P57768 344 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 C10orf120Q5SQS8 335 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 BTBD8Q5XKL5 378 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 C1orf228Q6PIY5 440 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 RSRC2Q7L4I2 434 aaKnown RBP21.51■■□□□ 1.03
VARS-224ENST00000479051 SCD5Q86SK9 330 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 OSCP1Q8WVF1 389 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 IRGQQ8WZA9 623 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 ZFYVE19Q96K21 471 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 LHX5Q9H2C1 402 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 HEBP1Q9NRV9 189 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 DNMT3LQ9UJW3 386 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 SH3BP1Q9Y3L3 701 aa21.51■■□□□ 1.03
VARS-224ENST00000479051 HELZP42694 1942 aaKnown RBP21.51■■□□□ 1.03
VARS-224ENST00000479051 ARNTLO00327 626 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 SLC9A3R1O14745 358 aaPredicted RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 TEX33O43247 280 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 CYP11B1P15538 503 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 SOX5P35711 763 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 PGFP49763 221 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 KPNA1P52294 538 aaPredicted RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 MLLT6P55198 1093 aaPredicted RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 FANCCQ00597 558 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 TPRG1Q6ZUI0 275 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 FMNL3Q8IVF7 1028 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 FLCNQ8NFG4 579 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 ATP2A3Q93084 1043 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 FAM83CQ9BQN1 747 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 C8orf33Q9H7E9 229 aaPredicted RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 TBC1D17Q9HA65 648 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 OLA1Q9NTK5 396 aaKnown RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 OSER1Q9NX31 292 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 DUS2Q9NX74 493 aaKnown RBP21.5■■□□□ 1.03
VARS-224ENST00000479051 CFAP97Q9P2B7 532 aa21.5■■□□□ 1.03
VARS-224ENST00000479051 MRPS17Q9Y2R5 130 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms