RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 FRMD7Q6ZUT3 714 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 TFB1MQ8WVM0 346 aaKnown RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 NHSL1Q5SYE7 1610 aa22.02■■□□□ 1.11
SDF4-206ENST00000478938 DYTNA2CJ06 578 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 USP17L5A8MUK1 530 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 PI4K2BG5E9Z4 385 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SLITRK3O94933 977 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 H6PDO95479 791 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 CCDC130P13994 396 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 RFX1P22670 979 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 GSSP48637 474 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SF3B4Q15427 424 aaKnown RBP eCLIP22.01■■□□□ 1.119e-8■■■■□ 19.7
SDF4-206ENST00000478938 ATG16L1Q676U5 607 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 ITGA11Q9UKX5 1188 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 ASTN2O75129 1339 aaPredicted RBP22.01■■□□□ 1.11
SDF4-206ENST00000478938 SPATA31A5Q5VU36 1347 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SPATA31A7Q8IWB4 1347 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 KDM1AO60341 852 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 INHBBP09529 407 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 MSX2P35548 267 aaPredicted RBP22.01■■□□□ 1.11
SDF4-206ENST00000478938 BFSP1Q12934 665 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 NR1D2Q14995 579 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 NRF1Q16656 503 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 FAM209AQ5JX71 171 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 FAM182AQ5T1J6 154 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 WDR75Q8IWA0 830 aaKnown RBP22.01■■□□□ 1.11
SDF4-206ENST00000478938 PKP2Q99959 881 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 EHD1Q9H4M9 534 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 IFT122Q9HBG6 1241 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 EPS15L1Q9UBC2 864 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SHOC2Q9UQ13 582 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 CORINQ9Y5Q5 1042 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 SQORQ9Y6N5 450 aa22.01■■□□□ 1.11
SDF4-206ENST00000478938 IQANK1A0A1B0GTG1 560 aa22■■□□□ 1.11
SDF4-206ENST00000478938 KRBA1A5PL33 1030 aa22■■□□□ 1.11
SDF4-206ENST00000478938 GPR141Q7Z602 305 aa22■■□□□ 1.11
SDF4-206ENST00000478938 RSPH3Q86UC2 560 aa22■■□□□ 1.11
SDF4-206ENST00000478938 ZNF713Q8N859 430 aaPredicted RBP22■■□□□ 1.11
SDF4-206ENST00000478938 ADCY4Q8NFM4 1077 aa22■■□□□ 1.11
SDF4-206ENST00000478938 MMP19Q99542 508 aa22■■□□□ 1.11
SDF4-206ENST00000478938 GCOM2Q9BZD3 368 aaPredicted RBP22■■□□□ 1.11
SDF4-206ENST00000478938 CEP44Q9C0F1 390 aa22■■□□□ 1.11
SDF4-206ENST00000478938 VTA1Q9NP79 307 aa22■■□□□ 1.11
SDF4-206ENST00000478938 FAM155BO75949 473 aa22■■□□□ 1.11
SDF4-206ENST00000478938 PRDX5P30044 214 aa22■■□□□ 1.11
SDF4-206ENST00000478938 GCLMP48507 274 aa22■■□□□ 1.11
SDF4-206ENST00000478938 PCYT1AP49585 367 aa22■■□□□ 1.11
SDF4-206ENST00000478938 ATXN3P54252 364 aaPredicted RBP22■■□□□ 1.11
SDF4-206ENST00000478938 RGS21Q2M5E4 152 aa22■■□□□ 1.11
SDF4-206ENST00000478938 ARL13BQ3SXY8 428 aa22■■□□□ 1.11
SDF4-206ENST00000478938 PALM2Q8IXS6 379 aa22■■□□□ 1.11
SDF4-206ENST00000478938 CATSPER1Q8NEC5 780 aa22■■□□□ 1.11
SDF4-206ENST00000478938 TAMM41Q96BW9 452 aa22■■□□□ 1.11
SDF4-206ENST00000478938 CEP95Q96GE4 821 aa22■■□□□ 1.11
SDF4-206ENST00000478938 SENP7Q9BQF6 1050 aa22■■□□□ 1.11
SDF4-206ENST00000478938 NRDE2Q9H7Z3 1164 aa22■■□□□ 1.11
SDF4-206ENST00000478938 GPRC5DQ9NZD1 345 aa22■■□□□ 1.11
SDF4-206ENST00000478938 JAG2Q9Y219 1238 aa22■■□□□ 1.11
SDF4-206ENST00000478938 A0A1W2PPW3 197 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 IQCA1LA6NCM1 817 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 H0YIN7 160 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 EPHA3P29320 983 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 STAT2P52630 851 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 BNIP3Q12983 259 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 CIAPIN1Q6FI81 312 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 NUDCD3Q8IVD9 361 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 SGF29Q96ES7 293 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 A8MU76 341 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 H3BNH8 94 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 RPA1P27694 616 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 TCF7P36402 384 aaPredicted RBP21.99■■□□□ 1.11
SDF4-206ENST00000478938 HSPA13P48723 471 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 BMXP51813 675 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 PPP3CAQ08209 521 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 BBS9Q3SYG4 887 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 FAM71AQ8IYT1 594 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 AGPAT3Q9NRZ7 376 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 USTQ9Y2C2 406 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 IKBKGQ9Y6K9 419 aa21.99■■□□□ 1.11
SDF4-206ENST00000478938 SPATA31C1P0DKV0 1188 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 PTPN1P18031 435 aaKnown RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 EIF2AK2P19525 551 aaKnown RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 GABRB3P28472 473 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 EPC2Q52LR7 807 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 MYCT1Q8N699 235 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 ELMO3Q96BJ8 720 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 KREMEN1Q96MU8 473 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 TMEM121Q9BTD3 319 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 SLC13A1Q9BZW2 595 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 GID8Q9NWU2 228 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.98■■□□□ 1.11
SDF4-206ENST00000478938 CDH7Q9ULB5 785 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 PFDN6O15212 129 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 LYPLA1O75608 230 aaPredicted RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 CYP11B1P15538 503 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 WASHC5Q12768 1159 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 ITGADQ13349 1161 aa21.98■■□□□ 1.11
SDF4-206ENST00000478938 PPP6R3Q5H9R7 873 aaPredicted RBP21.98■■□□□ 1.11
SDF4-206ENST00000478938 ZNF778Q96MU6 729 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms