RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 BYSLQ13895 437 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 UAP1L1Q3KQV9 507 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 C10orf76Q5T2E6 689 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 SH3PXD2AQ5TCZ1 1133 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 TRMT11Q7Z4G4 463 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 ACOT1Q86TX2 421 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 BBS7Q8IWZ6 715 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 TMEFF1Q8IYR6 380 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 GRAMD1CQ8IYS0 662 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 ZNF513Q8N8E2 541 aaPredicted RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 PLEKHO2Q8TD55 490 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 PARD3BQ8TEW8 1205 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 ZFRQ96KR1 1074 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 NUSAP1Q9BXS6 441 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 DEC1Q9P2X7 70 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 ATXN2Q99700 1313 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 TNRC6BQ9UPQ9 1833 aaKnown RBP14.03□□□□□ -0.16
VCL-205ENST00000478896 PLXND1Q9Y4D7 1925 aa14.03□□□□□ -0.16
VCL-205ENST00000478896 MYO18AQ92614 2054 aaKnown RBP14.02□□□□□ -0.16
VCL-205ENST00000478896 CEP192Q8TEP8 1941 aa14.02□□□□□ -0.16
VCL-205ENST00000478896 GIPC1O14908 333 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 HOXC11O43248 304 aaPredicted RBP14.02□□□□□ -0.17
VCL-205ENST00000478896 TLR5O60602 858 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 C4BPAP04003 597 aaKnown RBP14.02□□□□□ -0.17
VCL-205ENST00000478896 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.17
VCL-205ENST00000478896 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 MAP3K7CLP57077 242 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 IRX4P78413 519 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 GOLGA8FQ08AF8 430 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 GOLGA8DPQ0D2H9 430 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 LMAN2Q12907 356 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 FOXC1Q12948 553 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 RESP18Q5W5W9 173 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 HSCBQ8IWL3 235 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 FUKQ8N0W3 1084 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 FRMD1Q8N878 549 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 TERB1Q8NA31 727 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 SLC2A14Q8TDB8 520 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 JAKMIP2Q96AA8 810 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 SDCBP2Q9H190 292 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 FBXO44Q9H4M3 255 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.17
VCL-205ENST00000478896 SPHK2Q9NRA0 654 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 FAM49BQ9NUQ9 324 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 COMMD8Q9NX08 183 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 SERTAD1Q9UHV2 236 aa14.02□□□□□ -0.17
VCL-205ENST00000478896 CNOT1A5YKK6 2376 aaKnown RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 NEDD8-MDP1E9PL57 170 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 TNFRSF10BO14763 440 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 ZBTB24O43167 697 aaPredicted RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 ADAM23O75077 832 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 TULP3O75386 442 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 VNN1O95497 513 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 PDIA4P13667 645 aaKnown RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 HOXB2P14652 356 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 ADORA2BP29275 332 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 DPP6P42658 865 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 MAPK8P45983 427 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 NDST1P52848 882 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 DLG4P78352 724 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 SGSM1Q2NKQ1 1148 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 SNX30Q5VWJ9 437 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 LYSMD4Q5XG99 296 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 PAQR9Q6ZVX9 377 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 SYT12Q8IV01 421 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 ETFBKMTQ8IXQ9 262 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 PHTF2Q8N3S3 785 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 KIAA0895Q8NCT3 520 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 XPO6Q96QU8 1125 aaKnown RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 SMOQ99835 787 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 BACH2Q9BYV9 841 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 IMPG2Q9BZV3 1241 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 DNAJC17Q9NVM6 304 aaKnown RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 HMGXB4Q9UGU5 601 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 EVLQ9UI08 416 aaPredicted RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 LSM7Q9UK45 103 aaKnown RBP14.01□□□□□ -0.17
VCL-205ENST00000478896 CFAP45Q9UL16 551 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 FRMD4BQ9Y2L6 1034 aa14.01□□□□□ -0.17
VCL-205ENST00000478896 ACACBO00763 2458 aa14□□□□□ -0.17
VCL-205ENST00000478896 A0A0A0MRY4 1105 aa14□□□□□ -0.17
VCL-205ENST00000478896 CDX4O14627 284 aaPredicted RBP14□□□□□ -0.17
VCL-205ENST00000478896 AP5Z1O43299 807 aa14□□□□□ -0.17
VCL-205ENST00000478896 BEST1O76090 585 aa14□□□□□ -0.17
VCL-205ENST00000478896 NR3C1P04150 777 aa14□□□□□ -0.17
VCL-205ENST00000478896 CFIP05156 583 aa14□□□□□ -0.17
VCL-205ENST00000478896 ZDHHC11BP0C7U3 371 aa14□□□□□ -0.17
VCL-205ENST00000478896 FAM200BP0CF97 657 aa14□□□□□ -0.17
VCL-205ENST00000478896 CEACAM1P13688 526 aa14□□□□□ -0.17
VCL-205ENST00000478896 WASP42768 502 aa14□□□□□ -0.17
VCL-205ENST00000478896 PTGER3P43115 390 aa14□□□□□ -0.17
VCL-205ENST00000478896 ATXN3P54252 364 aaPredicted RBP14□□□□□ -0.17
VCL-205ENST00000478896 CLDN10P78369 228 aa14□□□□□ -0.17
VCL-205ENST00000478896 RPL6Q02878 288 aaKnown RBP14□□□□□ -0.17
VCL-205ENST00000478896 STK4Q13043 487 aa14□□□□□ -0.17
VCL-205ENST00000478896 ZACNQ401N2 412 aa14□□□□□ -0.17
VCL-205ENST00000478896 KMT5BQ4FZB7 885 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms