RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 KIAA1191Q96A73 305 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 TINAGL1Q9GZM7 467 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 MYO1AQ9UBC5 1043 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 AGAP1Q9UPQ3 857 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 PTPRGP23470 1445 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 CLCA1A8K7I4 914 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 F5H423 210 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 M0QYG6 137 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 APOL1O14791 398 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 PPM1DO15297 605 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 UNC5CO95185 931 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 BMP15O95972 392 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 FAM163BP0C2L3 166 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 PIM1P11309 404 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 CTGFP29279 349 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 TRAPPC10P48553 1259 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC11A2P49281 568 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 CTBP1Q13363 440 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 PMS2P11Q13670 270 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZRSR2Q15696 482 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 C4orf46Q504U0 113 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 USP37Q86T82 979 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 MYLK4Q86YV6 388 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 LIX1LQ8IVB5 337 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 CCDC33Q8N5R6 958 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 VPS37AQ8NEZ2 397 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 POF1BQ8WVV4 589 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 RPL36ALQ969Q0 106 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 SH2D3AQ9BRG2 576 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 CRB3Q9BUF7 120 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 A1CFQ9NQ94 594 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 SERTAD4Q9NUC0 356 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 LRCH1Q9Y2L9 728 aa4.83□□□□□ -1.64
CDC42BPA-212ENST00000478573 IKBKBO14920 756 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 CREB3O43889 395 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 SOAT2O75908 522 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 JTBO76095 146 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 MT-ND5P03915 603 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 ANXA2P07355 339 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 GRPP07492 148 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 IL1R1P14778 569 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 JUPP14923 745 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 ABCB4P21439 1286 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 FGFR2P21802 821 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 KLRC1P26715 233 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 PCSK6P29122 969 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 GCLCP48506 637 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 ALDH9A1P49189 494 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 CLCN2P51788 898 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 WNT3P56703 355 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TUBA4AP68366 448 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TNFAIP2Q03169 654 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 INO80DQ53TQ3 878 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TEDDM1Q5T9Z0 273 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 PRAMEF17Q5VTA0 474 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 FAM160B1Q5W0V3 765 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 SKAP1Q86WV1 359 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 SDR16C5Q8N3Y7 309 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 C9orf106Q8NAJ2 232 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZBTB9Q96C00 473 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 IQCDQ96DY2 449 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TMEM41AQ96HV5 264 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 SNX22Q96L94 193 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 FCRL4Q96PJ5 515 aa4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 EPRSP07814 1512 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-212ENST00000478573 TEX14Q8IWB6 1497 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 WDR7Q9Y4E6 1490 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF521Q96K83 1311 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 PYCARD-AS1I3L0S3 204 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 QSOX1O00391 747 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 AREL1O15033 823 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 ADAMTS3O15072 1205 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 NHLRC4P0CG21 123 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 PTGER1P34995 402 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 VIPR2P41587 438 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 UCP3P55916 312 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 KRTAP10-9P60411 292 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 SLC35G1Q2M3R5 365 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 PROSER3Q2NL68 480 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 AMOTQ4VCS5 1084 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 ZNF618Q5T7W0 954 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 KLHDC7AQ5VTJ3 777 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 CATSPERGQ6ZRH7 1159 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 NEK8Q86SG6 692 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 DNAJC5GQ8N7S2 189 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 PCSK9Q8NBP7 692 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 FAM46DQ8NEK8 389 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 OR56A3Q8NH54 315 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 DENND1AQ8TEH3 1009 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 HERPUD2Q9BSE4 406 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 QTRT1Q9BXR0 403 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-212ENST00000478573 EIF2AQ9BY44 585 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms