RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KIF11P52732 1056 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 MESP2Q0VG99 397 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 ITPRIPL2Q3MIP1 535 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 ARHGAP17Q68EM7 881 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 C1orf210Q8IVY1 113 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 SFTPA1Q8IWL2 248 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
PTPN7-209ENST00000477554 SAMSN1Q9NSI8 373 aaKnown RBP18.62■□□□□ 0.57
PTPN7-209ENST00000477554 CFAP97Q9P2B7 532 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 TSPAN16Q9UKR8 245 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 PCDHB4Q9Y5E5 795 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 CD19P15391 556 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 CDK11BP21127 795 aaKnown RBP18.61■□□□□ 0.57
PTPN7-209ENST00000477554 BRD2P25440 801 aaKnown RBP18.61■□□□□ 0.57
PTPN7-209ENST00000477554 PDE4CQ08493 712 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 SNX30Q5VWJ9 437 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 BHLHA9Q7RTU4 235 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 PIGZQ86VD9 579 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 FAXDC2Q96IV6 333 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 OSBPL6Q9BZF3 934 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 ECT2Q9H8V3 914 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 SPATA6Q9NWH7 488 aaPredicted RBP18.61■□□□□ 0.57
PTPN7-209ENST00000477554 THG1LQ9NWX6 298 aaKnown RBP18.61■□□□□ 0.57
PTPN7-209ENST00000477554 ZMYM5Q9UJ78 669 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 SCML2Q9UQR0 700 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 R4GN57 208 aa18.61■□□□□ 0.57
PTPN7-209ENST00000477554 O00370 1275 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 PIK3R2O00459 728 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 IRF1P10914 325 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 ZNF18P17022 549 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 GJA4P35212 333 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 PLCB2Q00722 1185 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 MIIPQ5JXC2 388 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 HECTD3Q5T447 861 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 CDKAL1Q5VV42 579 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 FSTL4Q6MZW2 842 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 DPY19L2P1Q6NXN4 242 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 P2RY11Q96G91 374 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 USP3Q9Y6I4 520 aa18.6■□□□□ 0.57
PTPN7-209ENST00000477554 MAN2B1O00754 1011 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 P4HA2O15460 535 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 GREM1O60565 184 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 TLR5O60602 858 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 TCF3P15923 654 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 EEF1GP26641 437 aaKnown RBP18.59■□□□□ 0.57
PTPN7-209ENST00000477554 PPP3CCP48454 512 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 ZNF132P52740 706 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 NUBP1P53384 320 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 CCINQ13939 588 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 PKDCCQ504Y2 493 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 CC2D1AQ6P1N0 951 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-209ENST00000477554 RALGPS2Q86X27 583 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-209ENST00000477554 ANKRD52Q8NB46 1076 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 RBBP8NLQ8NC74 664 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-209ENST00000477554 OVCA2Q8WZ82 227 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 PRRX2Q99811 253 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 HSD3B7Q9H2F3 369 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 C8orf33Q9H7E9 229 aaPredicted RBP18.59■□□□□ 0.57
PTPN7-209ENST00000477554 SIX2Q9NPC8 291 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 EHD2Q9NZN4 543 aa18.59■□□□□ 0.57
PTPN7-209ENST00000477554 EGFP01133 1207 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 CYP17A1P05093 508 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 SP9P0CG40 484 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 PNMA6AP0CW24 399 aaPredicted RBP18.58■□□□□ 0.57
PTPN7-209ENST00000477554 TBXAS1P24557 533 aaPredicted RBP18.58■□□□□ 0.57
PTPN7-209ENST00000477554 IFNAR2P48551 515 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 RGS7P49802 495 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 MRE11P49959 708 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 GALK1P51570 392 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 SGO2Q562F6 1265 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 TCP11X2Q5H9J9 407 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 RAB41Q5JT25 222 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 TRIM65Q6PJ69 517 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 C12orf40Q86WS4 652 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 PDZD8Q8NEN9 1154 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 CHRDQ9H2X0 955 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 GRPEL1Q9HAV7 217 aa18.58■□□□□ 0.57
PTPN7-209ENST00000477554 UBE2TQ9NPD8 197 aaPredicted RBP18.58■□□□□ 0.57
PTPN7-209ENST00000477554 KCNJ18B7U540 433 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 RARGP13631 454 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 MTIF2P46199 727 aaKnown RBP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 RPS9P46781 194 aaKnown RBP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 SLC6A11P48066 632 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 MLLT6P55198 1093 aaPredicted RBP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 SATB1Q01826 763 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 DMWDQ09019 674 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 KCNJ12Q14500 433 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 PDGFRLQ15198 375 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 BBS7Q8IWZ6 715 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 CLEC4CQ8WTT0 213 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 KLF16Q9BXK1 252 aaPredicted RBP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 ULBP1Q9BZM6 244 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 FBXO44Q9H4M3 255 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 PNPLA8Q9NP80 782 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 TLR8Q9NR97 1041 aaKnown RBP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTPN7-209ENST00000477554 COMMD8Q9NX08 183 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 NAGPAQ9UK23 515 aa18.57■□□□□ 0.56
PTPN7-209ENST00000477554 MRPS17Q9Y2R5 130 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms