RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SYCE1Q8N0S2 351 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 ELMOD1Q8N336 334 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 MMGT1Q8N4V1 131 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 WDTC1Q8N5D0 677 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 SMG7Q92540 1137 aaKnown RBP17.74■□□□□ 0.43
EPHB4-204ENST00000477446 HLA-CQ95604 372 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 PSMG2Q969U7 264 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 CEP295NLQ96MC4 621 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF512Q96ME7 567 aaPredicted RBP17.74■□□□□ 0.43
EPHB4-204ENST00000477446 TLR10Q9BXR5 811 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 UBXN6Q9BZV1 441 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 LHX5Q9H2C1 402 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 PNPLA8Q9NP80 782 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 HCFC1R1Q9NWW0 138 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 ASB3Q9Y575 518 aa17.74■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF638Q14966 1978 aaKnown RBP17.73■□□□□ 0.43
EPHB4-204ENST00000477446 XIRP2A4UGR9 3374 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 H3BQ06 376 aaPredicted RBP17.73■□□□□ 0.43
EPHB4-204ENST00000477446 DDX3XO00571 662 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■□□ 15.1
EPHB4-204ENST00000477446 BUB1O43683 1085 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 PALMO75781 387 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 POU2F2P09086 479 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 TNFAIP3P21580 790 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 KCNA5P22460 613 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 CLUL1Q15846 466 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 MEI1Q5TIA1 1274 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 CCDC181Q5TID7 509 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 PMF1Q6P1K2 205 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 DENND5BQ6ZUT9 1274 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 GPRIN1Q7Z2K8 1008 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 GPR149Q86SP6 731 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 ITIH5Q86UX2 942 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 PIGZQ86VD9 579 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 NUP93Q8N1F7 819 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 AGPAT1Q99943 283 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 SYT11Q9BT88 431 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
EPHB4-204ENST00000477446 PRUNE2Q8WUY3 3088 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 GRID2IPA4D2P6 1211 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CSH1P0DML2 217 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CSH2P0DML3 217 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 HMGA1P17096 107 aaKnown RBP17.72■□□□□ 0.43
EPHB4-204ENST00000477446 PLA2G4AP47712 749 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 SLC5A3P53794 718 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 USP46P62068 366 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 TAF12Q16514 161 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 NOA1Q8NC60 698 aaKnown RBP17.72■□□□□ 0.43
EPHB4-204ENST00000477446 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CAPZA3Q96KX2 299 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 PIDD1Q9HB75 910 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CYTH4Q9UIA0 394 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CD207Q9UJ71 328 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 CDH22Q9UJ99 828 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 MAGED2Q9UNF1 606 aaPredicted RBP17.72■□□□□ 0.43
EPHB4-204ENST00000477446 NOTCH4Q99466 2003 aa17.72■□□□□ 0.43
EPHB4-204ENST00000477446 RHOXF2BP0C7M4 288 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 TMEM253P0C7T8 217 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 PTPN2P17706 415 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 MAP9Q49MG5 647 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 RAB41Q5JT25 222 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 GRASPQ7Z6J2 395 aaPredicted RBP17.71■□□□□ 0.43
EPHB4-204ENST00000477446 HS6ST3Q8IZP7 471 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 SMRP1Q8NCR6 262 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 OLIG1Q8TAK6 271 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 PCDHB18PQ96TA0 734 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 RHOXF2Q9BQY4 288 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 CORO1BQ9BR76 489 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 LRRC3Q9BY71 257 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 ZNF334Q9HCZ1 680 aaPredicted RBP17.71■□□□□ 0.43
EPHB4-204ENST00000477446 CEP83Q9Y592 693 aa17.71■□□□□ 0.43
EPHB4-204ENST00000477446 GABBR2O75899 941 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 CDH5P33151 784 aaPredicted RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 RGS7P49802 495 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 IFRD2Q12894 506 aaPredicted RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 LONRF2Q1L5Z9 754 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 GLE1Q53GS7 698 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 CES5AQ6NT32 575 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 TMEM35BQ8NCS4 154 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 STK32AQ8WU08 396 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 KCTD13Q8WZ19 329 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 TRMT2BQ96GJ1 504 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 PBKQ96KB5 322 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 MYRFLQ96LU7 910 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 TTLL2Q9BWV7 592 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 PACSIN1Q9BY11 444 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 PRDM6Q9NQX0 595 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 SEPT11Q9NVA2 429 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 COG5Q9UP83 839 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 SPTBN5Q9NRC6 3674 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 ZNF185O15231 689 aa17.7■□□□□ 0.42
EPHB4-204ENST00000477446 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 LSM8O95777 96 aaKnown RBP17.7■□□□□ 0.42
EPHB4-204ENST00000477446 CYP1A1P04798 512 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms