RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 IER5LQ5T953 404 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 TAF3Q5VWG9 929 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 BTBD8Q5XKL5 378 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 CACNA2D4Q7Z3S7 1137 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.286e-7■■□□□ 13
FDPS-211ENST00000477057 MIB1Q86YT6 1006 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 ARHGAP18Q8N392 663 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 SHC3Q92529 594 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 NDRG1Q92597 394 aaKnown RBP13.31□□□□□ -0.28
FDPS-211ENST00000477057 LRRC3BQ96PB8 259 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 FUCA2Q9BTY2 467 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 FOXQ1Q9C009 403 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 GTSE1Q9NYZ3 720 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 ARHGAP26Q9UNA1 814 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 HCN4Q9Y3Q4 1203 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 CEP83Q9Y592 693 aa13.31□□□□□ -0.28
FDPS-211ENST00000477057 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
FDPS-211ENST00000477057 TBX18O95935 607 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 HMBSP08397 361 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 ARSAP15289 507 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 PFKLP17858 780 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 WEE1P30291 646 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 ATP5C1P36542 298 aaKnown RBP13.3□□□□□ -0.28
FDPS-211ENST00000477057 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 PGFP49763 221 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 PSEN1P49768 467 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 YWHAGP61981 247 aaKnown RBP eCLIP13.3□□□□□ -0.28
FDPS-211ENST00000477057 PRKCQQ04759 706 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 FCHO2Q0JRZ9 810 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 EFEMP1Q12805 493 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 ZNF77Q15935 545 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 CCDC186Q7Z3E2 898 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 SLC47A2Q86VL8 602 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 CPA6Q8N4T0 437 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 ZNF606Q8WXB4 792 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 TSPY26PQ9H489 355 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 NMUR1Q9HB89 426 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 PLCB1Q9NQ66 1216 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 IL37Q9NZH6 218 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 DENND4CQ5VZ89 1909 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 COL4A3Q01955 1670 aa13.3□□□□□ -0.28
FDPS-211ENST00000477057 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 F8VZ95 297 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 GFPT2O94808 682 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 DCNP07585 359 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 TUBP50607 506 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 VCPP55072 806 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 BPIFB4P59827 614 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 SLC7A9P82251 487 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 ARID5AQ03989 594 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 PDGFRLQ15198 375 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 ITPRIPL2Q3MIP1 535 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 CWF19L1Q69YN2 538 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 PMF1Q6P1K2 205 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 OSCP1Q8WVF1 389 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 FAM3CQ92520 227 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 EDEM1Q92611 657 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 ATP2A3Q93084 1043 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 FAM149B1Q96BN6 582 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 NOX5Q96PH1 765 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 GANQ9H2C0 597 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 HSD3B7Q9H2F3 369 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 SEPT11Q9NVA2 429 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 OSER1Q9NX31 292 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 DNMT3LQ9UJW3 386 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 CNTN6Q9UQ52 1028 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
FDPS-211ENST00000477057 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
FDPS-211ENST00000477057 KANSL1LA0AUZ9 987 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 NFATC1O95644 943 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 CAVIN2O95810 425 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 ZDHHC11BP0C7U3 371 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 ACADSBP45954 432 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 NR1H3Q13133 447 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 RUNX3Q13761 415 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 IQCB1Q15051 598 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 SCD5Q86SK9 330 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
FDPS-211ENST00000477057 IPO4Q8TEX9 1081 aaKnown RBP13.28□□□□□ -0.28
FDPS-211ENST00000477057 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
FDPS-211ENST00000477057 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms