RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ADAM23O75077 832 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 AKAP3O75969 853 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 ADH1CP00326 375 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 RPN1P04843 607 aaKnown RBP12.35□□□□□ -0.43
VARS2-208ENST00000477052 APODP05090 189 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 PFKLP17858 780 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 PIK3CAP42336 1068 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 ASPAP45381 313 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 GCLMP48507 274 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 NDUFA8P51970 172 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 ANO4Q32M45 955 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 ZACNQ401N2 412 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 USP39Q53GS9 565 aaKnown RBP12.35□□□□□ -0.43
VARS2-208ENST00000477052 RNF43Q68DV7 783 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 PHTF2Q8N3S3 785 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 DEFB119Q8N690 84 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 EEF2KMTQ96G04 330 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 TNIP3Q96KP6 325 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 EDEM2Q9BV94 578 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 NACA2Q9H009 215 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 APOBEC3GQ9HC16 384 aaKnown RBP12.35□□□□□ -0.43
VARS2-208ENST00000477052 VPS45Q9NRW7 570 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 PCDHGA5Q9Y5G8 931 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 THADAQ6YHU6 1953 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 E2F8A0AVK6 867 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 C4orf47A7E2U8 309 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 PDXKO00764 312 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 CYP26A1O43174 497 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 TULP3O75386 442 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 ASS1P00966 412 aaKnown RBP12.34□□□□□ -0.43
VARS2-208ENST00000477052 CD58P19256 250 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 KIR2DL1P43626 348 aaPredicted RBP12.34□□□□□ -0.43
VARS2-208ENST00000477052 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
VARS2-208ENST00000477052 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 PMS2CLQ68D20 193 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 RASSF3Q86WH2 238 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 MIB1Q86YT6 1006 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 SLC9A9Q8IVB4 645 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 PGBD3Q8N328 593 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 PDZD8Q8NEN9 1154 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 BHMTQ93088 406 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 SPATA32Q96LK8 384 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 GOLPH3LQ9H4A5 285 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 IL37Q9NZH6 218 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 BCCIPQ9P287 314 aaKnown RBP eCLIP12.34□□□□□ -0.43
VARS2-208ENST00000477052 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
VARS2-208ENST00000477052 HCN2Q9UL51 889 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 HPSEQ9Y251 543 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 MYH10P35580 1976 aa12.34□□□□□ -0.43
VARS2-208ENST00000477052 CACNA1BQ00975 2339 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 MAP1BP46821 2468 aaKnown RBP12.33□□□□□ -0.44
VARS2-208ENST00000477052 TCRBV21S2A2A0A5A6 115 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 LNP1A1A4G5 178 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 TBC1D3BA6NDS4 549 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 HHLA1C9JL84 531 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 GREM1O60565 184 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 TLR5O60602 858 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 KIF20AO95235 890 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 ZDHHC11BP0C7U3 371 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 CMA1P23946 247 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 GRIA2P42262 883 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 PTGER3P43115 390 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 VAMP7P51809 220 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 LIMK1P53667 647 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 AP3M2P53677 418 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 MRPS21P82921 87 aaKnown RBP12.33□□□□□ -0.44
VARS2-208ENST00000477052 GAD2Q05329 585 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 C10orf76Q5T2E6 689 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 PSAPL1Q6NUJ1 521 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 TPGS1Q6ZTW0 290 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 CYP2U1Q7Z449 544 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.44
VARS2-208ENST00000477052 ETFBKMTQ8IXQ9 262 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 SMYD4Q8IYR2 804 aaPredicted RBP12.33□□□□□ -0.44
VARS2-208ENST00000477052 CRYBG2Q8N1P7 616 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 PIGKQ92643 395 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 CNOT6LQ96LI5 555 aaKnown RBP12.33□□□□□ -0.44
VARS2-208ENST00000477052 ACOX2Q99424 681 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 FSCN3Q9NQT6 498 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 TBC1D14Q9P2M4 693 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
VARS2-208ENST00000477052 ATXN2Q99700 1313 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms