RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 UNC13DQ70J99 1090 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 DHX40Q8IX18 779 aaKnown RBP6.94□□□□□ -1.3
CLDN4-205ENST00000476494 CCDC65Q8IXS2 484 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 EXOC8Q8IYI6 725 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 RGL4Q8IZJ4 473 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 PHTF2Q8N3S3 785 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 MAB21L3Q8N8X9 362 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 ASAP3Q8TDY4 903 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 ANP32BQ92688 251 aaKnown RBP6.94□□□□□ -1.3
CLDN4-205ENST00000476494 DDX12PQ92771 950 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 DYDC2Q96IM9 177 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 ZNF578Q96N58 590 aaPredicted RBP6.94□□□□□ -1.3
CLDN4-205ENST00000476494 UROC1Q96N76 676 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 ACAP3Q96P50 834 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 PGLYRP2Q96PD5 576 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 PLIN2Q99541 437 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 MTRQ99707 1265 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLDN4-205ENST00000476494 DPH1Q9BZG8 443 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 TRIM9Q9C026 710 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 KIF9Q9HAQ2 790 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 GRPEL1Q9HAV7 217 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 BCCIPQ9P287 314 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLDN4-205ENST00000476494 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 MAN1B1Q9UKM7 699 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
CLDN4-205ENST00000476494 TCHHQ07283 1943 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SVILO95425 2214 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 PDZD2O15018 2839 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SMIM28A0A1B0GU29 152 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ARHGEF35A5YM69 484 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 MYMKA6NI61 221 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 BECN2A8MW95 431 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 E9PMD0 336 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GOLGA6L19H0YKK7 550 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 CBX4O00257 560 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 IKBKBO14920 756 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 KLK10O43240 276 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 KRT18P05783 430 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 CDK4P11802 303 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 HMGA1P17096 107 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GAP43P17677 238 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ATF6P18850 670 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SCP2P22307 547 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GUCY2CP25092 1073 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 TNFRSF8P28908 595 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 CDC25CP30307 473 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ARL2P36404 184 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 RFC5P40937 340 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SLC6A11P48066 632 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ACADVLP49748 655 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SLC12A3P55017 1021 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ASIC1P78348 528 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 DNAJC3Q13217 504 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 CTTNQ14247 550 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 MCM6Q14566 821 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 MXD4Q14582 209 aaPredicted RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 MTF1Q14872 753 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SUZ12Q15022 739 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 IGFBP7Q16270 282 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ECM1Q16610 540 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 COBLL1Q53SF7 1204 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 WDR45BQ5MNZ6 344 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SYCP2LQ5T4T6 812 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ZNF280DQ6N043 979 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 FOXR2Q6PJQ5 311 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 PPP4R3CPQ6ZMV5 832 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GPBP1Q86WP2 473 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GAS2L3Q86XJ1 694 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 EFCAB13Q8IY85 973 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 GRAMD1CQ8IYS0 662 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 PGBD3Q8N328 593 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ZCCHC9Q8N567 271 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 DCBLD1Q8N8Z6 715 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ATAD1Q8NBU5 361 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 FOXJ1Q92949 421 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ATP2A3Q93084 1043 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 CCDC43Q96MW1 224 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 LXNQ9BS40 222 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 BHMT2Q9H2M3 363 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 PDZD7Q9H5P4 517 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ASCL3Q9NQ33 180 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 EXOC1Q9NV70 894 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 DUS2Q9NX74 493 aaKnown RBP6.93□□□□□ -1.3
CLDN4-205ENST00000476494 RGL1Q9NZL6 768 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SEL1LQ9UBV2 794 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ODF2LQ9ULJ1 636 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 WNT6Q9Y6F9 365 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 SDK2Q58EX2 2172 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 AKAP9Q99996 3911 aa6.93□□□□□ -1.3
CLDN4-205ENST00000476494 ABCA2Q9BZC7 2435 aa6.92□□□□□ -1.3
CLDN4-205ENST00000476494 TP53BP1Q12888 1972 aaPredicted RBP6.92□□□□□ -1.3
CLDN4-205ENST00000476494 A0A1B0GVT2 93 aa6.92□□□□□ -1.3
CLDN4-205ENST00000476494 MTMR11A4FU01 709 aa6.92□□□□□ -1.3
CLDN4-205ENST00000476494 BIN1O00499 593 aa6.92□□□□□ -1.3
CLDN4-205ENST00000476494 KCNK3O14649 394 aa6.92□□□□□ -1.3
CLDN4-205ENST00000476494 ENC1O14682 589 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms