RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CDH8P55286 799 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ANO4Q32M45 955 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 LYSMD4Q5XG99 296 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 SHC4Q6S5L8 630 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ARMCX6Q7L4S7 300 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 BBS7Q8IWZ6 715 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 NAT16Q8N8M0 369 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 TERB1Q8NA31 727 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 SCAMP5Q8TAC9 235 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 SLC32A1Q9H598 525 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 CCSER2Q9H7U1 834 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 SLC39A2Q9NP94 309 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ZDHHC4Q9NPG8 344 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 KRT82Q9NSB4 513 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 MBD1Q9UIS9 605 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ABCA7Q8IZY2 2146 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 PVALEFA0A1B0GWK0 134 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TLR5O60602 858 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TULP3O75386 442 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 ZDHHC11BP0C7U3 371 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 C1QTNF9P0C862 333 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 IRF1P10914 325 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 ENGP17813 658 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TRIM21P19474 475 aaKnown RBP11.47□□□□□ -0.57
CDRT1-205ENST00000475944 NTSR1P30989 418 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 PTGER3P43115 390 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 CASP4P49662 377 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 ATXN3P54252 364 aaPredicted RBP11.47□□□□□ -0.57
CDRT1-205ENST00000475944 GOLGA8FQ08AF8 430 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 GOLGA8DPQ0D2H9 430 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 NCOA4Q13772 614 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 MAP7D1Q3KQU3 841 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 C10orf76Q5T2E6 689 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 SLC23A3Q6PIS1 610 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 SLC36A4Q6YBV0 504 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 PAQR9Q6ZVX9 377 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 FUKQ8N0W3 1084 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 BLZF1Q9H2G9 400 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 FBXO44Q9H4M3 255 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TLR8Q9NR97 1041 aaKnown RBP11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 FAM13BQ9NYF5 915 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 GMIPQ9P107 970 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 PLXND1Q9Y4D7 1925 aa11.47□□□□□ -0.57
CDRT1-205ENST00000475944 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 USP24Q9UPU5 2620 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 ATXN2Q99700 1313 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 TMEM8BA6NDV4 472 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 LRRIQ3A6PVS8 624 aaPredicted RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 C4BPAP04003 597 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 CFIP05156 583 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 HOXB2P14652 356 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 ITPKAP23677 461 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 CASP1P29466 404 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 AFMP43652 599 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 MAPK8P45983 427 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 CLDN10P78369 228 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 RPL6Q02878 288 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 DUOXA1Q1HG43 343 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 PEAR1Q5VY43 1037 aaPredicted RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 GRAMD4Q6IC98 578 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 SDE2Q6IQ49 451 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 HTR3DQ70Z44 454 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 RABEPKQ7Z6M1 372 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 ACOT1Q86TX2 421 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 TMEM25Q86YD3 366 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 FRMD1Q8N878 549 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 DEFB124Q8NES8 71 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 CEP76Q8TAP6 659 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 PLEKHO2Q8TD55 490 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 SDCBP2Q9H190 292 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 CSNK1G1Q9HCP0 422 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 DNAJC17Q9NVM6 304 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 LSM7Q9UK45 103 aaKnown RBP11.46□□□□□ -0.57
CDRT1-205ENST00000475944 PILRBQ9UKJ0 227 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 ZMIZ1Q9ULJ6 1067 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 WASF3Q9UPY6 502 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 STARD13Q9Y3M8 1113 aa11.46□□□□□ -0.57
CDRT1-205ENST00000475944 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.58
CDRT1-205ENST00000475944 LAMA1P25391 3075 aa11.46□□□□□ -0.58
CDRT1-205ENST00000475944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
CDRT1-205ENST00000475944 UPK3BL1B0FP48 263 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 UPK3BL2E5RIL1 263 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 NEDD8-MDP1E9PL57 170 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 CACNG3O60359 315 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 ZNF217O75362 1048 aa11.45□□□□□ -0.58
CDRT1-205ENST00000475944 VNN1O95497 513 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms