RNA–Protein interactions for RNA: ENST00000475927.5

SERF2-215, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-215	ENST00000475927	PCDHGC3	Q9UN70	934 aa		13.74	□□□□□ -0.21
SERF2-215	ENST00000475927	SIT1	Q9Y3P8	196 aa		13.74	□□□□□ -0.21
SERF2-215	ENST00000475927		A0A1W2PQC6	194 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	KANSL1L	A0AUZ9	987 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	FAM86C2P	A6NEL3	165 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	NRG2	O14511	850 aa	Predicted RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	THAP12	O43422	761 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	TLR5	O60602	858 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	CFH	P08603	1231 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	STAT1	P42224	750 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	RPL34	P49207	117 aa	Known RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	CACNA2D1	P54289	1103 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	KCNMA1	Q12791	1236 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	DRAP1	Q14919	205 aa	Predicted RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	E2F5	Q15329	346 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	MLF2	Q15773	248 aa	Predicted RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	ZSCAN23	Q3MJ62	389 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	HSP90AA4P	Q58FG1	418 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	STXBP5	Q5T5C0	1151 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	BTBD8	Q5XKL5	378 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	PPP1R2P3	Q6NXS1	205 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	TMEM110	Q86TL2	294 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	ZDHHC17	Q8IUH5	632 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	SIX5	Q8N196	739 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	SYNPO	Q8N3V7	929 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	CPA6	Q8N4T0	437 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	RNF139	Q8WU17	664 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	OSCP1	Q8WVF1	389 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	SPAG5	Q96R06	1193 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	FUCA2	Q9BTY2	467 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	NUP58	Q9BVL2	599 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	IRX2	Q9BZI1	471 aa	Predicted RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	PLA2G2F	Q9BZM2	168 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	NUCKS1	Q9H1E3	243 aa	Known RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	TMEM30A	Q9NV96	361 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	DUS2	Q9NX74	493 aa	Known RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	TAB2	Q9NYJ8	693 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	NAGPA	Q9UK23	515 aa		13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	LSM7	Q9UK45	103 aa	Known RBP	13.73	□□□□□ -0.21
SERF2-215	ENST00000475927	TECTA	O75443	2155 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	NARS	O43776	548 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	NFATC1	O95644	943 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	SERPINC1	P01008	464 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	GLI1	P08151	1106 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	MBL2	P11226	248 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	RARG	P13631	454 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	GPD2	P43304	727 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	IFNAR2	P48551	515 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	IFRD2	Q12894	506 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	RUNX3	Q13761	415 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	MTF1	Q14872	753 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	IQCB1	Q15051	598 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	MAMSTR	Q6ZN01	415 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	HTR3D	Q70Z44	454 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	RSRC2	Q7L4I2	434 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	TTC30A	Q86WT1	665 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	DHX40	Q8IX18	779 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	TMEM35B	Q8NCS4	154 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	UBA3	Q8TBC4	463 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	SH3RF2	Q8TEC5	729 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	TFAP2B	Q92481	460 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	DDX23	Q9BUQ8	820 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	NAA15	Q9BXJ9	866 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	RNF38	Q9H0F5	515 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	SMOC2	Q9H3U7	446 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	SIX2	Q9NPC8	291 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	C11orf16	Q9NQ32	467 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	RTN4	Q9NQC3	1192 aa	Known RBP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	SH3BP1	Q9Y3L3	701 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	HCN4	Q9Y3Q4	1203 aa		13.72	□□□□□ -0.21
SERF2-215	ENST00000475927	C2orf78	A6NCI8	922 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927		M0QYV0	167 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	LEFTY2	O00292	366 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	CYP26A1	O43174	497 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	COCH	O43405	550 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	TADA3	O75528	432 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	LSM8	O95777	96 aa	Known RBP	13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	AOC1	P19801	751 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	AVPR2	P30518	371 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	CHKA	P35790	457 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	ZNF445	P59923	1031 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	YWHAG	P61981	247 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	RAPGEF1	Q13905	1077 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	SYCP1	Q15431	976 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	EFHC1	Q5JVL4	640 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	DGKK	Q5KSL6	1271 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	C10orf120	Q5SQS8	335 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	POTEH	Q6S545	545 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	TRIM72	Q6ZMU5	477 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	CACNA2D4	Q7Z3S7	1137 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	ADGRG2	Q8IZP9	1017 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	ZNF397	Q8NF99	534 aa	Predicted RBP	13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	KAT5	Q92993	513 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	LSM14B	Q9BX40	385 aa	Known RBP	13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	SLC4A5	Q9BY07	1137 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	GMIP	Q9P107	970 aa		13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	HBS1L	Q9Y450	684 aa	Known RBP	13.71	□□□□□ -0.21
SERF2-215	ENST00000475927	ADH1C	P00326	375 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms