RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 OTUB2Q96DC9 234 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 MED10Q9BTT4 135 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 CCSER2Q9H7U1 834 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 TMEM74BQ9NUR3 256 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
CCDC57-208ENST00000475635 WASF3Q9UPY6 502 aa13.17□□□□□ -0.3
CCDC57-208ENST00000475635 SPEGQ15772 3267 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 HOXC11O43248 304 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 EXOC3O60645 756 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 CUTAO60888 179 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 TULP3O75386 442 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 IRF1P10914 325 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 TUBP50607 506 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 BIRC3Q13489 604 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 BMT2Q1RMZ1 405 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ANO4Q32M45 955 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 SCARA5Q6ZMJ2 495 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 C12orf56Q8IXR9 622 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 DEFB124Q8NES8 71 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ELMO3Q96BJ8 720 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 NACA2Q9H009 215 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 SLC39A2Q9NP94 309 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 GMIPQ9P107 970 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 DEC1Q9P2X7 70 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ZFYVE26Q68DK2 2539 aa13.16□□□□□ -0.3
CCDC57-208ENST00000475635 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 CKAP5Q14008 2032 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 AP1G2O75843 785 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 YEATS4O95619 227 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ZDHHC11BP0C7U3 371 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ENGP17813 658 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ITPKAP23677 461 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 DPP6P42658 865 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 MAPK8P45983 427 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 NCOA4Q13772 614 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 KNOP1Q1ED39 458 aaKnown RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 PREPLQ4J6C6 727 aaPredicted RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 C10orf76Q5T2E6 689 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 TRMT11Q7Z4G4 463 aaKnown RBP13.15□□□□□ -0.3
CCDC57-208ENST00000475635 TMEM25Q86YD3 366 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 FUKQ8N0W3 1084 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 TERB1Q8NA31 727 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 WBP2Q969T9 261 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 SDCBP2Q9H190 292 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 ZMIZ1Q9ULJ6 1067 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 PKD1L2Q7Z442 2459 aa13.15□□□□□ -0.3
CCDC57-208ENST00000475635 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.31
CCDC57-208ENST00000475635 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 FAM92AA1XBS5 289 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 LRRIQ3A6PVS8 624 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-208ENST00000475635 TRIM24O15164 1050 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 AP5Z1O43299 807 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 TLR5O60602 858 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 BEST1O76090 585 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 CCDC130P13994 396 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 HOXB2P14652 356 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 GABRG2P18507 467 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 PGFP49763 221 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 AP3M2P53677 418 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 CLDN10P78369 228 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 ORC1Q13415 861 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 CUL4BQ13620 913 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 SLC23A3Q6PIS1 610 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 NUDT18Q6ZVK8 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms