RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 BTBD8Q5XKL5 378 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 BBS7Q8IWZ6 715 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 NAT16Q8N8M0 369 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 SDCBP2Q9H190 292 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 KRT82Q9NSB4 513 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 IL37Q9NZH6 218 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 MBD1Q9UIS9 605 aaPredicted RBP26.4■■□□□ 1.82
TMEM54-205ENST00000475208 PVALEFA0A1B0GWK0 134 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 TBC1D3BA6NDS4 549 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 LRRIQ3A6PVS8 624 aaPredicted RBP26.39■■□□□ 1.82
TMEM54-205ENST00000475208 AP1G2O75843 785 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 PTGER3P43115 390 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 AFMP43652 599 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 FOXC1Q12948 553 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 CUL4BQ13620 913 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 MAP7D1Q3KQU3 841 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 UAP1L1Q3KQV9 507 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 FOXD4L5Q5VV16 416 aaPredicted RBP26.39■■□□□ 1.82
TMEM54-205ENST00000475208 FUKQ8N0W3 1084 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 PGBD3Q8N328 593 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 PARD3BQ8TEW8 1205 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 FOXD4L4Q8WXT5 416 aaPredicted RBP26.39■■□□□ 1.82
TMEM54-205ENST00000475208 NACA2Q9H009 215 aa26.39■■□□□ 1.82
TMEM54-205ENST00000475208 TNRC6BQ9UPQ9 1833 aaKnown RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 TULP3O75386 442 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 PROS1P07225 676 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 ZDHHC11BP0C7U3 371 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 IRF1P10914 325 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 CSRP1P21291 193 aaKnown RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 AP3M2P53677 418 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 BYSLQ13895 437 aaKnown RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 ACOT1Q86TX2 421 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 ZNF513Q8N8E2 541 aaPredicted RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 GOLGA5Q8TBA6 731 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 WBP2Q969T9 261 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 DUSP9Q99956 384 aaKnown RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 NUSAP1Q9BXS6 441 aaKnown RBP26.38■■□□□ 1.81
TMEM54-205ENST00000475208 SPHK2Q9NRA0 654 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 COMMD8Q9NX08 183 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 DEC1Q9P2X7 70 aa26.38■■□□□ 1.81
TMEM54-205ENST00000475208 FAM92AA1XBS5 289 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 C4BPAP04003 597 aaKnown RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 CEACAM1P13688 526 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 CLDN10P78369 228 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 LMAN2Q12907 356 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 ANO4Q32M45 955 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 FOXD4L6Q3SYB3 417 aaPredicted RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 PREPLQ4J6C6 727 aaPredicted RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 C10orf76Q5T2E6 689 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 FOXD4L3Q6VB84 417 aaPredicted RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 TRMT11Q7Z4G4 463 aaKnown RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 TMEM25Q86YD3 366 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 SYT12Q8IV01 421 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 GRAMD1CQ8IYS0 662 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 ZMIZ2Q8NF64 920 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 TMEM74BQ9NUR3 256 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 FAM13BQ9NYF5 915 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 PLXND1Q9Y4D7 1925 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 ATXN2Q99700 1313 aaKnown RBP26.37■■□□□ 1.81
TMEM54-205ENST00000475208 CHD6Q8TD26 2715 aa26.37■■□□□ 1.81
TMEM54-205ENST00000475208 VNN1O95497 513 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 CCDC130P13994 396 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 ORC1Q13415 861 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 LYSMD4Q5XG99 296 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 TERB1Q8NA31 727 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 KCNV2Q8TDN2 545 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 SMOQ99835 787 aa26.36■■□□□ 1.81
TMEM54-205ENST00000475208 C1QTNF9BB2RNN3 333 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 TLR5O60602 858 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 BEST1O76090 585 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 C1QTNF9P0C862 333 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 MAPK8P45983 427 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 SPDYCQ5MJ68 293 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 UNQ6494/PRO21346Q6UXR6 183 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 DEFB124Q8NES8 71 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 SLC2A14Q8TDB8 520 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 DMAC2Q9NW81 257 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 HMGXB4Q9UGU5 601 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 PCDHA7Q9UN72 937 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 WASF3Q9UPY6 502 aa26.35■■□□□ 1.81
TMEM54-205ENST00000475208 MYO18AQ92614 2054 aaKnown RBP26.34■■□□□ 1.81
TMEM54-205ENST00000475208 TRIM24O15164 1050 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 P4HA1P13674 534 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 HOXB2P14652 356 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 ENGP17813 658 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 SPINK2P20155 84 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 DPP6P42658 865 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 ME1P48163 572 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 PGFP49763 221 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 RESP18Q5W5W9 173 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 NUDT18Q6ZVK8 323 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 FBXO44Q9H4M3 255 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 HCN2Q9UL51 889 aa26.34■■□□□ 1.81
TMEM54-205ENST00000475208 GABRG2P18507 467 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 ITPKAP23677 461 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 WASP42768 502 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 NDST1P52848 882 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 MAP3K7CLP57077 242 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 DLG4P78352 724 aa26.33■■□□□ 1.81
TMEM54-205ENST00000475208 MIB1Q86YT6 1006 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms