RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PDGFRLQ15198 375 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF77Q15935 545 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 EXOC3L4Q17RC7 722 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 EML3Q32P44 896 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 PRR23BQ6ZRT6 265 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 B3GALNT2Q8NCR0 500 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 PCMTD1Q96MG8 357 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 NT5C1BQ96P26 610 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 SDCBP2Q9H190 292 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 LIMA1Q9UHB6 759 aaKnown RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 COQ4Q9Y3A0 265 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 TRIM66O15016 1216 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 PAPSS2O95340 614 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 SIM2Q14190 667 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 RSPO4Q2I0M5 234 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 SCARA5Q6ZMJ2 495 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 LONP2Q86WA8 852 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 EZH1Q92800 747 aaPredicted RBP12.54□□□□□ -0.4
CLIP2-204ENST00000474962 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 CRACR2AQ9BSW2 395 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
CLIP2-204ENST00000474962 GTPBP10A4D1E9 387 aaKnown RBP12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 LEFTY2O00292 366 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 SCAMP3O14828 347 aaKnown RBP12.53□□□□□ -0.4
CLIP2-204ENST00000474962 RNF40O75150 1001 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 TPM3P06753 285 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ATP1A3P13637 1013 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF18P17022 549 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 TBXAS1P24557 533 aaPredicted RBP12.53□□□□□ -0.4
CLIP2-204ENST00000474962 HOXA6P31267 233 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 IFNAR2P48551 515 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 AMPD2Q01433 879 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 UBXN1Q04323 297 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 SPEM2Q0P670 501 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ORC1Q13415 861 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ERMP1Q7Z2K6 904 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ACOT1Q86TX2 421 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ADGRG2Q8IZP9 1017 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 NUP93Q8N1F7 819 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 CPA6Q8N4T0 437 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 TTC39CQ8N584 583 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
CLIP2-204ENST00000474962 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 FAXDC2Q96IV6 333 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 FAM81BQ96LP2 452 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
CLIP2-204ENST00000474962 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 RAB23Q9ULC3 237 aa12.53□□□□□ -0.4
CLIP2-204ENST00000474962 GREB1Q4ZG55 1949 aa12.52□□□□□ -0.4
CLIP2-204ENST00000474962 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 ATG13O75143 517 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 DRD1P21728 446 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 YWHAQP27348 245 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 PPP3CCP48454 512 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 PGFP49763 221 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 SLC7A9P82251 487 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 USP4Q13107 963 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 MIIPQ5JXC2 388 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 LAIR1Q6GTX8 287 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 DGLUCYQ7Z3D6 616 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 PPM1KQ8N3J5 372 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 C12orf29Q8N999 325 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 TATDN2Q93075 761 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 MED10Q9BTT4 135 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 ELOVL4Q9GZR5 314 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 DLL3Q9NYJ7 618 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 EHD2Q9NZN4 543 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 GMEB2Q9UKD1 530 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 USP18Q9UMW8 372 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 CPQQ9Y646 472 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 SPTBN2O15020 2390 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 OBSL1O75147 1896 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.41
CLIP2-204ENST00000474962 TNFRSF10BO14763 440 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 BEST1O76090 585 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 OAS1P00973 400 aaKnown RBP12.51□□□□□ -0.41
CLIP2-204ENST00000474962 RETP07949 1114 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 TCF3P15923 654 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CD58P19256 250 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 SLC9A1P19634 815 aa12.51□□□□□ -0.41
CLIP2-204ENST00000474962 CNR2P34972 360 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms