RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF516Q92618 1163 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 MAML3Q96JK9 1138 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 PHF12Q96QT6 1004 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 COA1Q9GZY4 146 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 ZBTB21Q9ULJ3 1066 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 MYOCOSA0A1B0GUC4 107 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 C3orf70A6NLC5 250 aaPredicted RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 RFPL1O75677 317 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 SNRPAP09012 282 aaKnown RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 CD48P09326 243 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 POLR2MP0CAP2 368 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 SERPINB8P50452 374 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 BRDTQ58F21 947 aaPredicted RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 ANGEL2Q5VTE6 544 aaKnown RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 SEPT12Q8IYM1 358 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 ALDH16A1Q8IZ83 802 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 RTKN2Q8IZC4 609 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 LRRC43Q8N309 656 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 CCDC33Q8N5R6 958 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 APOL6Q9BWW8 343 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 SUDS3Q9H7L9 328 aaPredicted RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 XAB2Q9HCS7 855 aaKnown RBP19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 PLK2Q9NYY3 685 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 APPL1Q9UKG1 709 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 ZNF232Q9UNY5 417 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 AGTPBP1Q9UPW5 1226 aa19.33■□□□□ 0.68
ECHDC1-214ENST00000474289 GOLGB1Q14789 3259 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 CST8O60676 142 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 KRT37O76014 449 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 MYBPC1Q00872 1141 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 CBX3Q13185 183 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 GK3PQ14409 553 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 CC2D2BQ6DHV5 1058 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 C15orf39Q6ZRI6 1047 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 DEFB107AQ8IZN7 70 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 FAM71DQ8N9W8 422 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 CXorf49A8MYA2 514 aaPredicted RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 SIN3BO75182 1162 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 AVILO75366 819 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 BPGMP07738 259 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 VIL1P09327 827 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 MMP8P22894 467 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 BMPR2Q13873 1038 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 CNGA3Q16281 694 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 RAB3IL1Q8TBN0 382 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 NLRP4Q96MN2 994 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 ZNF778Q96MU6 729 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 RIT2Q99578 217 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 MRPL1Q9BYD6 325 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 DDX56Q9NY93 547 aaKnown RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 PCDHB4Q9Y5E5 795 aa19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 ASTN2O75129 1339 aaPredicted RBP19.32■□□□□ 0.68
ECHDC1-214ENST00000474289 QSER1Q2KHR3 1735 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 ARHGAP10A1A4S6 786 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 TRMUO75648 421 aaKnown RBP19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 TNFAIP8O95379 198 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 L1CAMP32004 1257 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 CRKP46108 304 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 STX3Q13277 289 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 SMTNL2Q2TAL5 461 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 WDR44Q5JSH3 913 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 FAM102BQ5T8I3 360 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 KLHL35Q6PF15 583 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 TSHZ1Q6ZSZ6 1077 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 TRIM67Q6ZTA4 783 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 NUP93Q8N1F7 819 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 PRPF31Q8WWY3 499 aaKnown RBP19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 HSPBAP1Q96EW2 488 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 CFAP36Q96G28 342 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 CNBD2Q96M20 576 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 PRPF18Q99633 342 aaKnown RBP19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 ZNF696Q9H7X3 374 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 TTLL3Q9Y4R7 772 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 LTBP1Q14766 1721 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 KLHL2O95198 593 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 CRTAMO95727 393 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 ITGAXP20702 1163 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 PEX6Q13608 980 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 KRT81Q14533 505 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 DCUN1D2Q6PH85 259 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 HHIPL2Q6UWX4 724 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 ZNF410Q86VK4 478 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 AHI1Q8N157 1196 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 PQLC1Q8N2U9 271 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 FBXW8Q8N3Y1 598 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 ZBTB8BQ8NAP8 495 aaPredicted RBP19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 Q9H521 79 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 THAP1Q9NVV9 213 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 SH3GLB1Q9Y371 365 aa19.31■□□□□ 0.68
ECHDC1-214ENST00000474289 SPAG6O75602 509 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 TOP3BO95985 862 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 HLA-DRAP01903 254 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 YWHABP31946 246 aaKnown RBP19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 APOFQ13790 326 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 DPYSL3Q14195 570 aa19.3■□□□□ 0.68
ECHDC1-214ENST00000474289 IYDQ6PHW0 289 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms