RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PGFP49763 221 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 SNX16P57768 344 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX56-209ENST00000473924 CDR2Q01850 454 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 PDCLQ13371 301 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 PM20D1Q6GTS8 502 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 RSRC2Q7L4I2 434 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 MFSD6LQ8IWD5 586 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 BPIFB1Q8TDL5 484 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 CPLX3Q8WVH0 158 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 NDRG1Q92597 394 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 CDK5RAP1Q96SZ6 601 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 EDEM3Q9BZQ6 932 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 RNF38Q9H0F5 515 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 SYNCQ9H7C4 482 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 BRD9Q9H8M2 597 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 NMUR1Q9HB89 426 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
DDX56-209ENST00000473924 SMPD4Q9NXE4 827 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 OBP2AQ9NY56 170 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 CCL26Q9Y258 94 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 MYO10Q9HD67 2058 aa13.04□□□□□ -0.32
DDX56-209ENST00000473924 E5RJQ4 531 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 ZNF263O14978 683 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 NARSO43776 548 aaKnown RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 SRFP11831 508 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 GDI1P31150 447 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 DAOAP59103 153 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 ZXDAP98168 799 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 ZNF268Q14587 947 aaPredicted RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 ASIC2Q16515 512 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SFMBT2Q5VUG0 894 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 SCD5Q86SK9 330 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SCML4Q8N228 414 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 MSANTD4Q8NCY6 345 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 RNF139Q8WU17 664 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 BAP1Q92560 729 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX56-209ENST00000473924 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 TTYH3Q9C0H2 523 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SMOC2Q9H3U7 446 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX56-209ENST00000473924 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 CYTH4Q9UIA0 394 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 NOCTQ9UK39 431 aaKnown RBP13.03□□□□□ -0.32
DDX56-209ENST00000473924 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 ARHGAP26Q9UNA1 814 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 DUSP12Q9UNI6 340 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX56-209ENST00000473924 CPQQ9Y646 472 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 VCANP13611 3396 aa13.03□□□□□ -0.32
DDX56-209ENST00000473924 A0A0C4DFX4 3053 aa13.02□□□□□ -0.32
DDX56-209ENST00000473924 A0A1W2PQJ5 194 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 FAM170AA1A519 330 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 YJEFN3A6XGL0 299 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 E7ENQ6 273 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 GABBR2O75899 941 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 LSM8O95777 96 aaKnown RBP13.02□□□□□ -0.33
DDX56-209ENST00000473924 OLFM2O95897 454 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 TBX18O95935 607 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.33
DDX56-209ENST00000473924 GPC5P78333 572 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 SLC7A9P82251 487 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 PFKPQ01813 784 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 GOLGA8FQ08AF8 430 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 GOLGA8DPQ0D2H9 430 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 TRIM72Q6ZMU5 477 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 TMEM110Q86TL2 294 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 DDX42Q86XP3 938 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDX56-209ENST00000473924 CLEC4CQ8WTT0 213 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 EDAQ92838 391 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 IRF7Q92985 503 aa13.02□□□□□ -0.33
DDX56-209ENST00000473924 FAM149B1Q96BN6 582 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms