RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 DSCR9P59020 149 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 CFHR3Q02985 330 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 MYO1EQ12965 1108 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 IZUMO4Q1ZYL8 232 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 EARS2Q5JPH6 523 aaKnown RBP2.52□□□□□ -2.01
CCDC39-203ENST00000473854 CEP85LQ5SZL2 805 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 RTL10Q7L3V2 364 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 CXorf36Q9H7Y0 433 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 KCNG2Q9UJ96 466 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 ZNF335Q9H4Z2 1342 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 C2CD4BA6NLJ0 364 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 ZNF814B7Z6K7 855 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 GRPP07492 148 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 C5AR1P21730 350 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 COMPP49747 757 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 DIO1P49895 249 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 WNT3P56703 355 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 KRTAP10-3P60369 221 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 KIF23Q02241 960 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 KRT17Q04695 432 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 ACAP2Q15057 778 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 CCDC6Q16204 474 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 SLC4A8Q2Y0W8 1093 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 CT47A1Q5JQC4 288 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 EMC10Q5UCC4 262 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 STRA8Q7Z7C7 330 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 WIPF2Q8TF74 440 aaPredicted RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 IGFBPL1Q8WX77 278 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 JADE3Q92613 823 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 LPAR1Q92633 364 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 COA7Q96BR5 231 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 CDT1Q9H211 546 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 PAPOLBQ9NRJ5 636 aaKnown RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 ANAPC4Q9UJX5 808 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 COG5Q9UP83 839 aa2.51□□□□□ -2.01
CCDC39-203ENST00000473854 ZCCHC6Q5VYS8 1495 aaKnown RBP2.51□□□□□ -2.01
CCDC39-203ENST00000473854 DOCK7Q96N67 2140 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 A0A1B0GUV1 79 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 BTBD18B2RXH4 712 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 hCG_1984214I3L0E3 225 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 PODXLO00592 558 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 PRPF4O43172 522 aaKnown RBP eCLIP2.5□□□□□ -2.01
CCDC39-203ENST00000473854 PLAUP00749 431 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 ACAA1P09110 424 aaPredicted RBP2.5□□□□□ -2.01
CCDC39-203ENST00000473854 HOXC6P09630 235 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 GM2AP17900 193 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 ADORA2AP29274 412 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 VEGFCP49767 419 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 MTHFSP49914 203 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 PRKAG1P54619 331 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 TROAPQ12815 778 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 CCDC144BQ3MJ40 725 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 CERCAMQ5T4B2 595 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 RNF219Q5W0B1 726 aaPredicted RBP2.5□□□□□ -2.01
CCDC39-203ENST00000473854 DBF4BQ8NFT6 615 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 BRIX1Q8TDN6 353 aaKnown RBP2.5□□□□□ -2.01
CCDC39-203ENST00000473854 CHAC2Q8WUX2 184 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 OIT3Q8WWZ8 545 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 C17orf80Q9BSJ5 609 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 SCNM1Q9BWG6 230 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 TRIM36Q9NQ86 728 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 MKS1Q9NXB0 559 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 MSRB1Q9NZV6 116 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 ABCF2Q9UG63 623 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 MYO6Q9UM54 1294 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 MRPS17Q9Y2R5 130 aaKnown RBP2.5□□□□□ -2.01
CCDC39-203ENST00000473854 SNX14Q9Y5W7 946 aa2.5□□□□□ -2.01
CCDC39-203ENST00000473854 CKAP5Q14008 2032 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 KLHL33A6NCF5 533 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 ANTXRLA6NF34 631 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 MYO1CO00159 1063 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 CLIC1O00299 241 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 GPR39O43194 453 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 DTNBO60941 627 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 UNC5CO95185 931 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 CREB1P16220 341 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 ATF7P17544 494 aaPredicted RBP2.49□□□□□ -2.01
CCDC39-203ENST00000473854 DGKEP52429 567 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 ERVFC1-1P60608 527 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 NOGQ13253 232 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 SLC14A1Q13336 389 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 MFSD13AQ14CX5 517 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 SHBQ15464 509 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 HEATR3Q7Z4Q2 680 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 AFAP1L2Q8N4X5 818 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 LMO3Q8TAP4 145 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 WDR66Q8TBY9 1149 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 TAF15Q92804 592 aaKnown RBP eCLIP2.49□□□□□ -2.01
CCDC39-203ENST00000473854 TRMT61AQ96FX7 289 aaKnown RBP2.49□□□□□ -2.01
CCDC39-203ENST00000473854 XPR1Q9UBH6 696 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 MGAT4CQ9UBM8 478 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 DRG1Q9Y295 367 aaKnown RBP2.49□□□□□ -2.01
CCDC39-203ENST00000473854 PCDHA3Q9Y5H8 950 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 MRFAP1Q9Y605 127 aa2.49□□□□□ -2.01
CCDC39-203ENST00000473854 COL2A1P02458 1487 aaPredicted RBP2.48□□□□□ -2.01
CCDC39-203ENST00000473854 VNN1O95497 513 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 KCNA3P22001 575 aa2.48□□□□□ -2.01
CCDC39-203ENST00000473854 PRKAR1BP31321 381 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms