RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 MAGEA10P43363 369 aaPredicted RBP11.25□□□□□ -0.61
SP140-208ENST00000473711 MAGEA11P43364 429 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 RWDD2BP57060 319 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 DAOAP59103 153 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 ATP11AP98196 1134 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
SP140-208ENST00000473711 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 DUSP4Q13115 394 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CDO1Q16878 200 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CCDC14Q49A88 953 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CFAP221Q4G0U5 840 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 ATP13A4Q4VNC1 1196 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 RAB6CQ53S08 254 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SH3PXD2AQ5TCZ1 1133 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 DCAF12L1Q5VU92 463 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 VSTM1Q6UX27 236 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 HFE2Q6ZVN8 426 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 RHOT1Q8IXI2 618 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 DEFB106AQ8N104 65 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 TTC9BQ8N6N2 239 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 ARFGAP1Q8N6T3 406 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 MYRIPQ8NFW9 859 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SCAMP5Q8TAC9 235 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SPPL2BQ8TCT7 592 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 FAM149B1Q96BN6 582 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CFAP57Q96MR6 1250 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CLSTN3Q9BQT9 956 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CNPY3Q9BT09 278 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 RAB6CQ9H0N0 254 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 CNGB3Q9NQW8 809 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.25□□□□□ -0.61
SP140-208ENST00000473711 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
SP140-208ENST00000473711 SZT2Q5T011 3432 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 CTAGE15A4D2H0 777 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 YJEFN3A6XGL0 299 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 E7ENQ6 273 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 TNFRSF10BO14763 440 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 TRIM66O15016 1216 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 PSTPIP1O43586 416 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 HSF2BPO75031 334 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 LRCH4O75427 683 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 DAB1O75553 588 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 RNF8O76064 485 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 CTAGE8P0CG41 777 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 HAPLN1P10915 354 aaPredicted RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 MYOGP15173 224 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 SDC4P31431 198 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 CA8P35219 290 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 BMPR1AP36894 532 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 YWHAZP63104 245 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 ROR1Q01973 937 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 ACAP1Q15027 740 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 SHHQ15465 462 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 ZFYVE27Q5T4F4 411 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 TXNRD3NBQ6F5E7 133 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 ARCQ7LC44 396 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 CTAGE6Q86UF2 777 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 CTAGE4Q8IX94 777 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 NUP93Q8N1F7 819 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 RASGEF1CQ8N431 466 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 STKLD1Q8NE28 680 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 GPR152Q8TDT2 470 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 C2orf15Q8WU43 125 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 CLP1Q92989 425 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 WNT2BQ93097 391 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 RNPC3Q96LT9 517 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 SEPT5Q99719 369 aaPredicted RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 DDX23Q9BUQ8 820 aaKnown RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 CRISPLD1Q9H336 500 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 ZWILCHQ9H900 591 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 RNF14Q9UBS8 474 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 NAALADL1Q9UQQ1 740 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
SP140-208ENST00000473711 ARIH1Q9Y4X5 557 aaPredicted RBP11.24□□□□□ -0.61
SP140-208ENST00000473711 USP3Q9Y6I4 520 aa11.24□□□□□ -0.61
SP140-208ENST00000473711 LINC01553A4QN01 128 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 CAPN9O14815 690 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 SART1O43290 800 aaKnown RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 CXCL14O95715 111 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 TRUB2O95900 331 aaKnown RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 GLI1P08151 1106 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 TFE3P19532 575 aaPredicted RBP11.23□□□□□ -0.61
SP140-208ENST00000473711 IL1R2P27930 398 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 MIPP30301 263 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 CTNNB1P35222 781 aa11.23□□□□□ -0.61
SP140-208ENST00000473711 NOS2P35228 1153 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms