RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SIM1P81133 766 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 SLC7A9P82251 487 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 GRIN1Q05586 938 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 IFRD2Q12894 506 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 ALCAMQ13740 583 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 RABEP1Q15276 862 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 DHCR24Q15392 516 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 CCDC142Q17RM4 750 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 SPDYCQ5MJ68 293 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 DNTTIP2Q5QJE6 756 aaKnown RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 TDRD10Q5VZ19 366 aaKnown RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 RRAGBQ5VZM2 374 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 FAM171BQ6P995 826 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 STXBP4Q6ZWJ1 553 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 TRMT11Q7Z4G4 463 aaKnown RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 BRAPQ7Z569 592 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 OSTM1Q86WC4 334 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 DDX42Q86XP3 938 aaKnown RBP eCLIP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 GPD1LQ8N335 351 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 KIAA1958Q8N8K9 716 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 IL17RCQ8NAC3 791 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 OLIG1Q8TAK6 271 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 CEP76Q8TAP6 659 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 HMGB4Q8WW32 186 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 SYAP1Q96A49 352 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 PCED1BQ96HM7 432 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 EPSTI1Q96J88 318 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 TMX3Q96JJ7 454 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 PKMYT1Q99640 499 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 KIF2CQ99661 725 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 SNX25Q9H3E2 840 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 PCIF1Q9H4Z3 704 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 PDE11AQ9HCR9 933 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 TBC1D14Q9P2M4 693 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 WASF3Q9UPY6 502 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 NEUROG3Q9Y4Z2 214 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-205ENST00000473344 CPQQ9Y646 472 aa7.37□□□□□ -1.23
CKS1B-205ENST00000473344 KIF26AQ9ULI4 1882 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ATXN2Q99700 1313 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 RALGAPA1Q6GYQ0 2036 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 TBC1D3BA6NDS4 549 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF840PA6NDX5 716 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ZNF233A6NK53 670 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SRRM3A6NNA2 597 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 F8VP50 259 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SGK1O00141 431 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SCAMP3O14828 347 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 KIAA0391O15091 583 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ST8SIA5O15466 376 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 CLSTN1O94985 981 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 MBL2P11226 248 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 HOXD12P35452 270 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 GRIA2P42262 883 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 TNFRSF4P43489 277 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SLC6A11P48066 632 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 USP46P62068 366 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 TNNC1P63316 161 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 NOP14P78316 857 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ZXDBP98169 803 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 GAD2Q05329 585 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 KDSRQ06136 332 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 GFPT1Q06210 699 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 TAF10Q12962 218 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ACAP1Q15027 740 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SYCP1Q15431 976 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SURF1Q15526 300 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 DUOXA1Q1HG43 343 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 MDH1BQ5I0G3 518 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SDE2Q6IQ49 451 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SLC36A4Q6YBV0 504 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 RABEPKQ7Z6M1 372 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 FRMD1Q8N878 549 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 PDZD8Q8NEN9 1154 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 OR6B3Q8NGW1 331 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 MYCBPAPQ8TBZ2 947 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 GATA6Q92908 595 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 THAP11Q96EK4 314 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 FNBP1Q96RU3 617 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 CBWD1Q9BRT8 395 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 STRA6Q9BX79 667 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ELOVL4Q9GZR5 314 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 NACA2Q9H009 215 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 ZDHHC4Q9NPG8 344 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 OLFML3Q9NRN5 406 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 PANK4Q9NVE7 773 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 CALCOCO1Q9P1Z2 691 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 CFAP97Q9P2B7 532 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SLC6A14Q9UN76 642 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 FCF1Q9Y324 198 aaKnown RBP7.36□□□□□ -1.23
CKS1B-205ENST00000473344 MSRB2Q9Y3D2 182 aa7.36□□□□□ -1.23
CKS1B-205ENST00000473344 SH3BP1Q9Y3L3 701 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms