RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 GCLMP48507 274 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 CCR3P51677 355 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 APBA1Q02410 837 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PPP3CAQ08209 521 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 DMTNQ08495 405 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PSMD6Q15008 389 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 SF3A2Q15428 464 aaKnown RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 SLC5A9Q2M3M2 681 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 DCAF4L1Q3SXM0 396 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PABPC1LQ4VXU2 614 aaKnown RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 SEZ6Q53EL9 994 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PPM1LQ5SGD2 360 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 C1orf220Q5T0J3 134 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 LIN9Q5TKA1 542 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 LMBRD2Q68DH5 695 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 IL31Q6EBC2 164 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 UNQ6494/PRO21346Q6UXR6 183 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 APBB1IPQ7Z5R6 666 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 ATCAYQ86WG3 371 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 CEP120Q8N960 986 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 LNX1Q8TBB1 728 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 SLC7A14Q8TBB6 771 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PARD3BQ8TEW8 1205 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 DNASE1L2Q92874 299 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 MRRFQ96E11 262 aaKnown RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 CCDC51Q96ER9 411 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 FAM84AQ96KN4 292 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 FNBP1Q96RU3 617 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 CGRRF1Q99675 332 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PAAF1Q9BRP4 392 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 ADPGKQ9BRR6 497 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 IER2Q9BTL4 223 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 NUP58Q9BVL2 599 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 GANQ9H2C0 597 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PDE11AQ9HCR9 933 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 POLMQ9NP87 494 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 ABHD10Q9NUJ1 306 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 C2orf42Q9NWW7 574 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 GDE1Q9NZC3 331 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 CEP72Q9P209 647 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 TNFSF13BQ9Y275 285 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 LUC7L2Q9Y383 392 aaKnown RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 FHOD1Q9Y613 1164 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 GREB1Q4ZG55 1949 aa6.81□□□□□ -1.32
HDAC1-205ENST00000472928 ASCC3Q8N3C0 2202 aaKnown RBP6.81□□□□□ -1.32
HDAC1-205ENST00000472928 PCNX2A6NKB5 2137 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PTPRJQ12913 1337 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 VWA8A3KMH1 1905 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 RNF225M0QZC1 329 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 MAN2B1O00754 1011 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 DYNC1I1O14576 645 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 P4HA2O15460 535 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 FOXD2O60548 495 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CLSTN1O94985 981 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 KCNK5O95279 499 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PAPSS2O95340 614 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 NPTXRO95502 500 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CXCL8P10145 99 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CHRNB1P11230 501 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 SKILP12757 684 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 SLC9A1P19634 815 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PON1P27169 355 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PIK3CAP42336 1068 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CXCL12P48061 93 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 POLR2FP61218 127 aaKnown RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 OSTNP61366 133 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ZBED6P86452 979 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ENPEPQ07075 957 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 KCNMA1Q12791 1236 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CETN1Q12798 172 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 BIRC3Q13489 604 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 RAPGEF1Q13905 1077 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 GRM2Q14416 872 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ENOX2Q16206 610 aaKnown RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PSMD5Q16401 504 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 FIGNQ5HY92 759 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 WDR44Q5JSH3 913 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 STPG1Q5TH74 334 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 E4F1Q66K89 784 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 NOTUMQ6P988 496 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 PDXDC1Q6P996 788 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 TRIM65Q6PJ69 517 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CRELD2Q6UXH1 353 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 CACNA2D4Q7Z3S7 1137 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 LONP2Q86WA8 852 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 TMEM139Q8IV31 216 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ZNF397Q8NF99 534 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 ELSPBP1Q96BH3 223 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 MCRS1Q96EZ8 462 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 IFT43Q96FT9 208 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 DNAJC7Q99615 494 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 BAG1Q99933 345 aaPredicted RBP6.8□□□□□ -1.32
HDAC1-205ENST00000472928 TTPALQ9BTX7 342 aa6.8□□□□□ -1.32
HDAC1-205ENST00000472928 NXF3Q9H4D5 531 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms