RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 F8VP50 259 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ZBTB24O43167 697 aaPredicted RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 PRPF6O94906 941 aaKnown RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 GABRG2P18507 467 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 KDSRQ06136 332 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ZNF33AQ06730 810 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 TAF10Q12962 218 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 LY6G5CQ5SRR4 150 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 VSTM1Q6UX27 236 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 NAXDQ8IW45 347 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ETFBKMTQ8IXQ9 262 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 NAT16Q8N8M0 369 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 FSIP1Q8NA03 581 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 MYCBPAPQ8TBZ2 947 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 SPATA18Q8TC71 538 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 CACTINQ8WUQ7 758 aaKnown RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 HPS3Q969F9 1004 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 HVCN1Q96D96 273 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ERLEC1Q96DZ1 483 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 P2RY11Q96G91 374 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 HPDLQ96IR7 371 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ACCSQ96QU6 501 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ACOX2Q99424 681 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 TRIM9Q9C026 710 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 MRPL44Q9H9J2 332 aaKnown RBP9.94□□□□□ -0.82
VCL-204ENST00000472585 INTS13Q9NVM9 706 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 TRPM5Q9NZQ8 1165 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 CFAP97Q9P2B7 532 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ITGA11Q9UKX5 1188 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 CDH9Q9ULB4 789 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 ZNF462Q96JM2 2506 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 MYOFQ9NZM1 2061 aa9.94□□□□□ -0.82
VCL-204ENST00000472585 A0A1W2PQF6 199 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 TCRBV21S2A2A0A5A6 115 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 CLDN5O00501 218 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 GREM1O60565 184 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 GJB3O75712 270 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 APODP05090 189 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 GARTP22102 1010 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 WARSP23381 471 aaKnown RBP9.93□□□□□ -0.82
VCL-204ENST00000472585 PCSK1P29120 753 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ABCD1P33897 745 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 GRIA2P42262 883 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 WASP42768 502 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 TNFRSF4P43489 277 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ABCG1P45844 678 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 NOP14P78316 857 aaKnown RBP9.93□□□□□ -0.82
VCL-204ENST00000472585 CYP27A1Q02318 531 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 CYP4F3Q08477 520 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 PLEKHG6Q3KR16 790 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 C8orf34Q49A92 452 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 MDH1BQ5I0G3 518 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 PAQR9Q6ZVX9 377 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 DPH6Q7L8W6 267 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 TMEM25Q86YD3 366 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 SCUBE3Q8IX30 993 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 RGL4Q8IZJ4 473 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ELMO3Q96BJ8 720 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 C8orf48Q96LL4 319 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 KCNK16Q96T55 309 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 B3GNT5Q9BYG0 378 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 PANK2Q9BZ23 570 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ZNF518BQ9C0D4 1074 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 SLC6A17Q9H1V8 727 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 ARHGEF4Q9NR80 690 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 PLSCR2Q9NRY7 297 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 DKK4Q9UBT3 224 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 CHORDC1Q9UHD1 332 aaPredicted RBP9.93□□□□□ -0.82
VCL-204ENST00000472585 FBXO2Q9UK22 296 aaPredicted RBP9.93□□□□□ -0.82
VCL-204ENST00000472585 CFAP46Q8IYW2 2715 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 MYO18BQ8IUG5 2567 aa9.93□□□□□ -0.82
VCL-204ENST00000472585 A0A1W2PQD8 194 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 H3BQV1 296 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 COCHO43405 550 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 TULP3O75386 442 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 GCNT3O95395 438 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 ABL1P00519 1130 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 ADH5P11766 374 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 GNSP15586 552 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 PFKLP17858 780 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 PTPN1P18031 435 aaKnown RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 EIF2DP41214 584 aaKnown RBP9.92□□□□□ -0.82
VCL-204ENST00000472585 PDE6CP51160 858 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 RESTQ13127 1097 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 SYCP2LQ5T4T6 812 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 FAM173BQ6P4H8 233 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 C4orf50Q6ZRC1 276 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 BBS7Q8IWZ6 715 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 GPD1LQ8N335 351 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 KIAA1958Q8N8K9 716 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 SCAMP5Q8TAC9 235 aa9.92□□□□□ -0.82
VCL-204ENST00000472585 SETD7Q8WTS6 366 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms