RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ANGPT1Q15389 498 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 STILQ15468 1287 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 EML3Q32P44 896 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 PKDCCQ504Y2 493 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 TCP11X2Q5H9J9 407 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 MIIPQ5JXC2 388 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ENOSF1Q7L5Y1 443 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 SCD5Q86SK9 330 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
SYN3-211ENST00000472027 C1orf210Q8IVY1 113 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ADGRG2Q8IZP9 1017 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 CPA6Q8N4T0 437 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 KIAA1958Q8N8K9 716 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ATOH1Q92858 354 aaPredicted RBP9.64□□□□□ -0.87
SYN3-211ENST00000472027 ATP2A3Q93084 1043 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 CHFRQ96EP1 664 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ZFRQ96KR1 1074 aaKnown RBP9.64□□□□□ -0.87
SYN3-211ENST00000472027 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ZSWIM1Q9BR11 485 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 NACA2Q9H009 215 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 CYLDQ9NQC7 956 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 ANO10Q9NW15 660 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 SPATA6Q9NWH7 488 aaPredicted RBP9.64□□□□□ -0.87
SYN3-211ENST00000472027 TMEM63CQ9P1W3 806 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 CFAP97Q9P2B7 532 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 APEX2Q9UBZ4 518 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 NAGPAQ9UK23 515 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 NUDT5Q9UKK9 219 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 CNTN6Q9UQ52 1028 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 DENND4CQ5VZ89 1909 aa9.64□□□□□ -0.87
SYN3-211ENST00000472027 COL4A2P08572 1712 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 E2F8A0AVK6 867 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 NFATC1O95644 943 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 ZBED1O96006 694 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 SETSIPP0DME0 302 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 RALAP11233 206 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 KRT5P13647 590 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 EEF1GP26641 437 aaKnown RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 GJA4P35212 333 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 PSEN1P49768 467 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 GALK1P51570 392 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 KCNMA1Q12791 1236 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 NR1H3Q13133 447 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 STX1AQ16623 288 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 ARHGAP44Q17R89 818 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 PM20D1Q6GTS8 502 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 C11orf57Q6ZUT1 292 aaPredicted RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 MAML2Q8IZL2 1156 aaPredicted RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 ZNF276Q8N554 614 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 SLC35F5Q8WV83 523 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 KCTD13Q8WZ19 329 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 NDRG1Q92597 394 aaKnown RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 WBP2Q969T9 261 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 PHOX2BQ99453 314 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 KLF16Q9BXK1 252 aaPredicted RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 ULBP1Q9BZM6 244 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 LRRC4Q9HBW1 653 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
SYN3-211ENST00000472027 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYN3-211ENST00000472027 FANCLQ9NW38 375 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 CLIC5Q9NZA1 410 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYN3-211ENST00000472027 SH3BP1Q9Y3L3 701 aa9.63□□□□□ -0.87
SYN3-211ENST00000472027 TICRRQ7Z2Z1 1910 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 TRIOO75962 3097 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 BECN2A8MW95 431 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 M0QYV0 167 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 PES1O00541 588 aaKnown RBP9.62□□□□□ -0.87
SYN3-211ENST00000472027 TRDMT1O14717 391 aaKnown RBP9.62□□□□□ -0.87
SYN3-211ENST00000472027 MDM4O15151 490 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 LAMTOR5O43504 91 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 GABBR2O75899 941 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 IRF1P10914 325 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 LCP1P13796 627 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 USP8P40818 1118 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 YWHAGP61981 247 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYN3-211ENST00000472027 MTAPQ13126 283 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 CCINQ13939 588 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 LRRC32Q14392 662 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 GAS6Q14393 721 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 DHCR24Q15392 516 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 TMEM196Q5HYL7 178 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 DGKKQ5KSL6 1271 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 C10orf120Q5SQS8 335 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 CDKAL1Q5VV42 579 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 DPY19L2P1Q6NXN4 242 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 PMF1Q6P1K2 205 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 TADA2BQ86TJ2 420 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 ARHGAP18Q8N392 663 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 ZNF606Q8WXB4 792 aa9.62□□□□□ -0.87
SYN3-211ENST00000472027 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
SYN3-211ENST00000472027 VPS16Q9H269 839 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms