RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MRGPRX1Q96LB2 322 aa20.24■□□□□ 0.83
SORT1-203ENST00000471996 GABRG3Q99928 467 aa20.24■□□□□ 0.83
SORT1-203ENST00000471996 SPHK2Q9NRA0 654 aa20.24■□□□□ 0.83
SORT1-203ENST00000471996 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
SORT1-203ENST00000471996 URB1O60287 2271 aaKnown RBP20.24■□□□□ 0.83
SORT1-203ENST00000471996 PPP1R37O75864 691 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 PDGFRBP09619 1106 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 ATXN1LP0C7T5 689 aaKnown RBP20.23■□□□□ 0.83
SORT1-203ENST00000471996 UBA7P41226 1012 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 MYO1EQ12965 1108 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 ANO4Q32M45 955 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 TMEM25Q86YD3 366 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 MARCH9Q86YJ5 346 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 ERLEC1Q96DZ1 483 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 DUSP9Q99956 384 aaKnown RBP20.23■□□□□ 0.83
SORT1-203ENST00000471996 STRA6Q9BX79 667 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 MTMR12Q9C0I1 747 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 SLC6A17Q9H1V8 727 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 IL21RQ9HBE5 538 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 SH3BP1Q9Y3L3 701 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 ASXL3Q9C0F0 2248 aa20.23■□□□□ 0.83
SORT1-203ENST00000471996 BPTFQ12830 3046 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 TK2O00142 265 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 COCHO43405 550 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 LDHAP00338 332 aaKnown RBP20.22■□□□□ 0.83
SORT1-203ENST00000471996 WARSP23381 471 aaKnown RBP20.22■□□□□ 0.83
SORT1-203ENST00000471996 CD6P30203 668 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 CAMK2BQ13554 666 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 DBX2Q6ZNG2 339 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 BBS7Q8IWZ6 715 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 GALNT15Q8N3T1 639 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 CDC6Q99741 560 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 GAREM1Q9H706 876 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 TM7SF3Q9NS93 570 aa20.22■□□□□ 0.83
SORT1-203ENST00000471996 CILPO75339 1184 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 C1QL1O75973 258 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 CER1O95813 267 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 TMEM191BP0C7N4 346 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 CACNA2D1P54289 1103 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 KCNA1Q09470 495 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 MDH1BQ5I0G3 518 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 GRAMD4Q6IC98 578 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 SFR1Q86XK3 245 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
SORT1-203ENST00000471996 HPDLQ96IR7 371 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 PRDM16Q9HAZ2 1276 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 DNAJC17Q9NVM6 304 aaKnown RBP20.21■□□□□ 0.83
SORT1-203ENST00000471996 EXOC7Q9UPT5 735 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 R3HCC1Q9Y3T6 440 aaKnown RBP20.21■□□□□ 0.83
SORT1-203ENST00000471996 RAD54BQ9Y620 910 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 MYO18AQ92614 2054 aaKnown RBP20.21■□□□□ 0.83
SORT1-203ENST00000471996 MYOFQ9NZM1 2061 aa20.21■□□□□ 0.83
SORT1-203ENST00000471996 MEI4A8MW99 385 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 YWHAQP27348 245 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 MATKP42679 507 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 ABCG1P45844 678 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 IFRD2Q12894 506 aaPredicted RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 HECTD3Q5T447 861 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 IL27RAQ6UWB1 636 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 KIAA1324Q6UXG2 1013 aaKnown RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 ZCCHC9Q8N567 271 aaKnown RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 PDZD8Q8NEN9 1154 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 RHBDD1Q8TEB9 315 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 OVCA2Q8WZ82 227 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 SLC39A7Q92504 469 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 LARP4BQ92615 738 aaKnown RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 ZSCAN31Q96LW9 406 aaPredicted RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 TMEM30AQ9NV96 361 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 FNDC3AQ9Y2H6 1198 aaKnown RBP20.2■□□□□ 0.82
SORT1-203ENST00000471996 PCDHGB2Q9Y5G2 931 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 PTPRBP23467 1997 aa20.2■□□□□ 0.82
SORT1-203ENST00000471996 GOLGA8IPA6NC78 632 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 GOLGA8JA6NMD2 632 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 PRRT4C9JH25 899 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 GFRA2O00451 464 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 FLRT2O43155 660 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 NCAM1P13591 858 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 GARTP22102 1010 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 BNC1Q01954 994 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 HLA-BQ31612 363 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 METTL3Q86U44 580 aaKnown RBP20.19■□□□□ 0.82
SORT1-203ENST00000471996 NUP93Q8N1F7 819 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 PDCD7Q8N8D1 485 aaKnown RBP20.19■□□□□ 0.82
SORT1-203ENST00000471996 CADM4Q8NFZ8 388 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 SCFD1Q8WVM8 642 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 FBXO32Q969P5 355 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 TOE1Q96GM8 510 aaKnown RBP20.19■□□□□ 0.82
SORT1-203ENST00000471996 ANKRD36BP1Q96IX9 119 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 ACCSQ96QU6 501 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 MIR1-1HGQ9H1L0 117 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 INTS13Q9NVM9 706 aa20.19■□□□□ 0.82
SORT1-203ENST00000471996 WSB2Q9NYS7 404 aaPredicted RBP20.19■□□□□ 0.82
SORT1-203ENST00000471996 BCAT2O15382 392 aaPredicted RBP20.18■□□□□ 0.82
SORT1-203ENST00000471996 CACNG3O60359 315 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 DDIT3P35638 169 aa20.18■□□□□ 0.82
SORT1-203ENST00000471996 L1TD1Q5T7N2 865 aaKnown RBP20.18■□□□□ 0.82
SORT1-203ENST00000471996 SNX30Q5VWJ9 437 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms