RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 KIF11P52732 1056 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 RAD23BP54727 409 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 ZNF394Q53GI3 561 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 HEATR6Q6AI08 1181 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 LAIR1Q6GTX8 287 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 RHBDF2Q6PJF5 856 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 FOXR2Q6PJQ5 311 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 SLC4A11Q8NBS3 891 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 CCDC150Q8NCX0 1101 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 RPLP0P6Q8NHW5 317 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TATDN2Q93075 761 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 SLC35C1Q96A29 364 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 OTUB2Q96DC9 234 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 DUSP16Q9BY84 665 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 NMUR1Q9HB89 426 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 PARD6AQ9NPB6 346 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 CYLDQ9NQC7 956 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 CISHQ9NSE2 258 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 POLR3BQ9NW08 1133 aaPredicted RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 OSER1Q9NX31 292 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 TBC1D14Q9P2M4 693 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 HOOK1Q9UJC3 728 aaKnown RBP12.17□□□□□ -0.46
COL4A3-205ENST00000471862 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
COL4A3-205ENST00000471862 ANTXRLA6NF34 631 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 PSMA7O14818 248 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 PMM2O15305 246 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CYP26A1O43174 497 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 PPP1R2P41236 205 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 MESP2Q0VG99 397 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 SIM2Q14190 667 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 LPAL2Q16609 132 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 TCERG1LQ5VWI1 586 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ARHGAP17Q68EM7 881 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ISM2Q6H9L7 571 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 TTI2Q6NXR4 508 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 SYT13Q7L8C5 426 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 C12orf40Q86WS4 652 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ETFBKMTQ8IXQ9 262 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 PHTF2Q8N3S3 785 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CAMKK1Q8N5S9 505 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 GPR161Q8N6U8 529 aaKnown RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 UBR7Q8N806 425 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 USP33Q8TEY7 942 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ACDQ96AP0 544 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 RMDN1Q96DB5 314 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 KLF16Q9BXK1 252 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 GMEB2Q9UKD1 530 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
COL4A3-205ENST00000471862 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 SDK1Q7Z5N4 2213 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 CACNA1AO00555 2505 aa12.16□□□□□ -0.46
COL4A3-205ENST00000471862 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 HOXC11O43248 304 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-205ENST00000471862 TBX18O95935 607 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 ADH1CP00326 375 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 RETP07949 1114 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 ADH5P11766 374 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 SLC6A11P48066 632 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
COL4A3-205ENST00000471862 STIM1Q13586 685 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 CUL2Q13617 745 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 MORC3Q14149 939 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 DMC1Q14565 340 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 KLHDC10Q6PID8 442 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 PRR23BQ6ZRT6 265 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 HTR3DQ70Z44 454 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 SCD5Q86SK9 330 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 BBS7Q8IWZ6 715 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 ZNF276Q8N554 614 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 GAB3Q8WWW8 586 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
COL4A3-205ENST00000471862 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
COL4A3-205ENST00000471862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
COL4A3-205ENST00000471862 DLL3Q9NYJ7 618 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 SH3BP1Q9Y3L3 701 aa12.15□□□□□ -0.46
COL4A3-205ENST00000471862 A0A1W2PQH9 124 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 LRP3O75074 770 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 RARGP13631 454 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 ATP5C1P36542 298 aaKnown RBP12.14□□□□□ -0.47
COL4A3-205ENST00000471862 FMO5P49326 533 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 GAD2Q05329 585 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 SFTPA1Q8IWL2 248 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 CCDC26Q8TAB7 109 aa12.14□□□□□ -0.47
COL4A3-205ENST00000471862 HEXIM2Q96MH2 286 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms