RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TSPY26PQ9H489 355 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 ACP6Q9NPH0 428 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 CNGB3Q9NQW8 809 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 A0A1W2PQH9 124 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 FAM86C2PA6NEL3 165 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ARNTLO00327 626 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 TLR5O60602 858 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 SERPINC1P01008 464 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 MBL2P11226 248 aaPredicted RBP16.07■□□□□ 0.16
SDC3-203ENST00000471567 RALAP11233 206 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
SDC3-203ENST00000471567 ACADSBP45954 432 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 PGFP49763 221 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 MLLT6P55198 1093 aaPredicted RBP16.07■□□□□ 0.16
SDC3-203ENST00000471567 PRKCQQ04759 706 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ADIGQ0VDE8 80 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ZNF77Q15935 545 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 CC2D1AQ6P1N0 951 aaPredicted RBP16.07■□□□□ 0.16
SDC3-203ENST00000471567 DENND1BQ6P3S1 775 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 SLC47A2Q86VL8 602 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 SIX5Q8N196 739 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 SIX6OS1Q8N1H7 587 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 SH3RF2Q8TEC5 729 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 LRFN3Q9BTN0 628 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ULBP1Q9BZM6 244 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 CCSER2Q9H7U1 834 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 NMUR1Q9HB89 426 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 ARHGEF3Q9NR81 526 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDC3-203ENST00000471567 OSER1Q9NX31 292 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 NAGPAQ9UK23 515 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 CPQQ9Y646 472 aa16.07■□□□□ 0.16
SDC3-203ENST00000471567 A0A1W2PQC6 194 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 KRBA1A5PL33 1030 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 LEFTY2O00292 366 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 EPHB6O15197 1021 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 TEX33O43247 280 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 FBXO21O94952 628 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 PNMA6AP0CW24 399 aaPredicted RBP16.06■□□□□ 0.16
SDC3-203ENST00000471567 RARGP13631 454 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 GLULP15104 373 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 KRT9P35527 623 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 RGS7P49802 495 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 JAM2P57087 298 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 STARD6P59095 220 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 MTF1Q14872 753 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 NR1I3Q14994 352 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 MLF2Q15773 248 aaPredicted RBP16.06■□□□□ 0.16
SDC3-203ENST00000471567 HFE2Q6ZVN8 426 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 CSGALNACT1Q8TDX6 532 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
SDC3-203ENST00000471567 SPAG5Q96R06 1193 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 SLC4A5Q9BY07 1137 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 NACA2Q9H009 215 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 NLRC4Q9NPP4 1024 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
SDC3-203ENST00000471567 GABBR2O75899 941 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 LCP1P13796 627 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 CYP11B1P15538 503 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 SOX5P35711 763 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 STAT1P42224 750 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 DAOAP59103 153 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 ZNF445P59923 1031 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
SDC3-203ENST00000471567 ZXDBP98169 803 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 FANCCQ00597 558 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 BHLHA9Q7RTU4 235 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 FBXL6Q8N531 539 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 RIN3Q8TB24 985 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 OSCP1Q8WVF1 389 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 MSANTD3Q96H12 275 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 MFSD1Q9H3U5 465 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 DNMT3LQ9UJW3 386 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 CEP83Q9Y592 693 aa16.05■□□□□ 0.16
SDC3-203ENST00000471567 MYO16Q9Y6X6 1858 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 SLC9A3R1O14745 358 aaPredicted RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 SART1O43290 800 aaKnown RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 SNX16P57768 344 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 C10orf120Q5SQS8 335 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 BTBD8Q5XKL5 378 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 C1orf228Q6PIY5 440 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 ZNF677Q86XU0 584 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 ZFYVE19Q96K21 471 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 ZFRQ96KR1 1074 aaKnown RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 NOX5Q96PH1 765 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 DDX23Q9BUQ8 820 aaKnown RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 KLF16Q9BXK1 252 aaPredicted RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 C8orf33Q9H7E9 229 aaPredicted RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 ST7Q9NRC1 585 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 HEBP1Q9NRV9 189 aa16.04■□□□□ 0.16
SDC3-203ENST00000471567 OLA1Q9NTK5 396 aaKnown RBP16.04■□□□□ 0.16
SDC3-203ENST00000471567 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms