RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ATG13O75143 517 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 GADD45BO75293 160 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-203ENST00000471344 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
COL1A1-203ENST00000471344 GTF2H1P32780 548 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 DMC1Q14565 340 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 CCDC6Q16204 474 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 FBXO43Q4G163 708 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 COBLL1Q53SF7 1204 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 C2orf27AQ580R0 203 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 TCERG1LQ5VWI1 586 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 CEP68Q76N32 757 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 FBXL13Q8NEE6 735 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 USP33Q8TEY7 942 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 SECISBP2LQ93073 1101 aaKnown RBP16.22■□□□□ 0.19
COL1A1-203ENST00000471344 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 GSDMAQ96QA5 445 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 CISHQ9NSE2 258 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 RAB20Q9NX57 234 aa16.22■□□□□ 0.19
COL1A1-203ENST00000471344 A0A1W2PQH9 124 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 E2F8A0AVK6 867 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 DCLK1O15075 740 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 GREM1O60565 184 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 RPP40O75818 363 aaKnown RBP16.21■□□□□ 0.19
COL1A1-203ENST00000471344 RETP07949 1114 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 ADH5P11766 374 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 HNRNPLP14866 589 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL1A1-203ENST00000471344 TUBP50607 506 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 SYT13Q7L8C5 426 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 DDX42Q86XP3 938 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL1A1-203ENST00000471344 CCDC33Q8N5R6 958 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 NAT16Q8N8M0 369 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 SLC4A11Q8NBS3 891 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 GAB3Q8WWW8 586 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 CCDC34Q96HJ3 373 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 COMMD8Q9NX08 183 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 DLL3Q9NYJ7 618 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 MAN1B1Q9UKM7 699 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
COL1A1-203ENST00000471344 SLC9A3R1O14745 358 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-203ENST00000471344 TRIM24O15164 1050 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
COL1A1-203ENST00000471344 SMC2O95347 1197 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 BMP6P22004 513 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 CNR2P34972 360 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 RAD23BP54727 409 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 EMC10Q5UCC4 262 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 SCD5Q86SK9 330 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 TMEM25Q86YD3 366 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 PHTF2Q8N3S3 785 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
COL1A1-203ENST00000471344 TSG101Q99816 390 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 KLF16Q9BXK1 252 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-203ENST00000471344 NACA2Q9H009 215 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 FBXO44Q9H4M3 255 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 TLR8Q9NR97 1041 aaKnown RBP16.2■□□□□ 0.18
COL1A1-203ENST00000471344 INVSQ9Y283 1065 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 SDK1Q7Z5N4 2213 aa16.2■□□□□ 0.18
COL1A1-203ENST00000471344 RALGAPA1Q6GYQ0 2036 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 SPAG17Q6Q759 2223 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 MED19A0JLT2 244 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-203ENST00000471344 AXIN1O15169 862 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 ADH1CP00326 375 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 CCDC192P0DO97 292 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 KIF11P52732 1056 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 FKBP3Q00688 224 aaKnown RBP16.19■□□□□ 0.18
COL1A1-203ENST00000471344 DGLUCYQ7Z3D6 616 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 ALLCQ8N6M5 410 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 SLC35C1Q96A29 364 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 EXOC4Q96A65 974 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 ACDQ96AP0 544 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 P2RY11Q96G91 374 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 PNKPQ96T60 521 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 DUSP9Q99956 384 aaKnown RBP16.19■□□□□ 0.18
COL1A1-203ENST00000471344 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 TPSD1Q9BZJ3 242 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 SMOC1Q9H4F8 434 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 CYLDQ9NQC7 956 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 SEMA4GQ9NTN9 838 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL1A1-203ENST00000471344 TBC1D14Q9P2M4 693 aa16.19■□□□□ 0.18
COL1A1-203ENST00000471344 CCDC163A0A0D9SF12 145 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 TULP2O00295 520 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 BIN1O00499 593 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 GDF9O60383 454 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 KAT7O95251 611 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 APBB3O95704 486 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 RARGP13631 454 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 TIE1P35590 1138 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 LRRC63Q05C16 580 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 LRMPQ12912 555 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 PUM1Q14671 1186 aaKnown RBP eCLIP16.18■□□□□ 0.18
COL1A1-203ENST00000471344 KLHL10Q6JEL2 608 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 TMEM92Q6UXU6 159 aa16.18■□□□□ 0.18
COL1A1-203ENST00000471344 ERMP1Q7Z2K6 904 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms