RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 GCC1Q96CN9 775 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 SNX27Q96L92 541 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 C20orf173Q96LM9 149 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 GNRHR2Q96P88 292 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 PNKPQ96T60 521 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 NAP1L4Q99733 375 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 TBC1D23Q9NUY8 699 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 ZSCAN32Q9NX65 697 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 RGL1Q9NZL6 768 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 RNF181Q9P0P0 153 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 ZFR2Q9UPR6 939 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 CDYLQ9Y232 598 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 GPR52Q9Y2T5 361 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 DUSP10Q9Y6W6 482 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 RTL1A6NKG5 1358 aa6.57□□□□□ -1.36
CKS1B-204ENST00000471245 ROCK2O75116 1388 aaKnown RBP6.57□□□□□ -1.36
CKS1B-204ENST00000471245 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ACKR2O00590 384 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 SOAT2O75908 522 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 NDST3O95803 873 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 PLATP00750 562 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ATXN1LP0C7T5 689 aaKnown RBP6.56□□□□□ -1.36
CKS1B-204ENST00000471245 HK1P19367 917 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 CPT1AP50416 773 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 RABGGTBP53611 331 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 SATB1Q01826 763 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ARHGEF7Q14155 803 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 PTK2BQ14289 1009 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 SPARCL1Q14515 664 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 IQCB1Q15051 598 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ALFQ53S48 1182 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 C1QL3Q5VWW1 255 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 RRAGBQ5VZM2 374 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 METRNLQ641Q3 311 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 TAPT1Q6NXT6 567 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ZDHHC24Q6UX98 284 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 GLIS1Q8NBF1 620 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 FAM71BQ8TC56 605 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 SMCR8Q8TEV9 937 aaPredicted RBP6.56□□□□□ -1.36
CKS1B-204ENST00000471245 PIGBQ92521 554 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 MED15Q96RN5 788 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 TRIB1Q96RU8 372 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 MAGEH1Q9H213 219 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 OBP2BQ9NPH6 170 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 MRPS18AQ9NVS2 196 aaKnown RBP6.56□□□□□ -1.36
CKS1B-204ENST00000471245 DACT1Q9NYF0 836 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 PPP4R1LQ9P1A2 415 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 PGAP2Q9UHJ9 254 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 SHOC2Q9UQ13 582 aa6.56□□□□□ -1.36
CKS1B-204ENST00000471245 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
CKS1B-204ENST00000471245 ADAMTS7Q9UKP4 1686 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 A0A0G2JLL6 359 aaPredicted RBP6.55□□□□□ -1.36
CKS1B-204ENST00000471245 CCDC195A0A1B0GUA6 201 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 NPEPPSL1A6NEC2 478 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 DCLK1O15075 740 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 FOXN1O15353 648 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 CNR2P34972 360 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 SERPINF1P36955 418 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 TOB1P50616 345 aaPredicted RBP6.55□□□□□ -1.36
CKS1B-204ENST00000471245 LOXL3P58215 753 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 TMF1P82094 1093 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 HHEXQ03014 270 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 PPFIA1Q13136 1202 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 MGAT5BQ3V5L5 792 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 PLA1AQ53H76 456 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 FAM102AQ5T9C2 384 aaPredicted RBP6.55□□□□□ -1.36
CKS1B-204ENST00000471245 ERICH6BQ5W0A0 696 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 FCRL6Q6DN72 434 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 PSD4Q8NDX1 1056 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 COG3Q96JB2 828 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 SLC46A1Q96NT5 459 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 NEU1Q99519 415 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 MAF1Q9H063 256 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 RNPEPQ9H4A4 650 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 FAM83DQ9H4H8 585 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 GRHPRQ9UBQ7 328 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 SMG6Q86US8 1419 aaKnown RBP6.55□□□□□ -1.36
CKS1B-204ENST00000471245 ANKRD26Q9UPS8 1709 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 CACNA1SQ13698 1873 aa6.55□□□□□ -1.36
CKS1B-204ENST00000471245 FER1L6Q2WGJ9 1857 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 NRXN2Q9P2S2 1712 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 AQP7P3A6NL99 342 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 E7ENX8 843 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 RAB27BO00194 218 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 ITGA5P08648 1049 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 GYS1P13807 737 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 EGR1P18146 543 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 TAP2Q03519 686 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 PRKG1Q13976 671 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 NFIXQ14938 502 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 RRS1Q15050 365 aaKnown RBP6.54□□□□□ -1.36
CKS1B-204ENST00000471245 NPY5RQ15761 445 aa6.54□□□□□ -1.36
CKS1B-204ENST00000471245 MAPKAPK3Q16644 382 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms