RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 UBL4BQ8N7F7 174 aa8.79□□□□□ -1
FDPS-209ENST00000471117 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
FDPS-209ENST00000471117 SPATA4Q8NEY3 305 aa8.79□□□□□ -1
FDPS-209ENST00000471117 UBA3Q8TBC4 463 aa8.79□□□□□ -1
FDPS-209ENST00000471117 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
FDPS-209ENST00000471117 SPATA18Q8TC71 538 aa8.79□□□□□ -1
FDPS-209ENST00000471117 ACTRT1Q8TDG2 376 aa8.79□□□□□ -1
FDPS-209ENST00000471117 HASPINQ8TF76 798 aa8.79□□□□□ -1
FDPS-209ENST00000471117 KBTBD7Q8WVZ9 684 aa8.79□□□□□ -1
FDPS-209ENST00000471117 ALG3Q92685 438 aa8.79□□□□□ -1
FDPS-209ENST00000471117 KRT35Q92764 455 aa8.79□□□□□ -1
FDPS-209ENST00000471117 SUSD3Q96L08 255 aa8.79□□□□□ -1
FDPS-209ENST00000471117 RHOXF2Q9BQY4 288 aa8.79□□□□□ -1
FDPS-209ENST00000471117 PARVAQ9NVD7 372 aa8.79□□□□□ -1
FDPS-209ENST00000471117 DNAJB4Q9UDY4 337 aa8.79□□□□□ -1
FDPS-209ENST00000471117 DSEQ9UL01 958 aa8.79□□□□□ -1
FDPS-209ENST00000471117 L1RE1Q9UN81 338 aa8.79□□□□□ -1
FDPS-209ENST00000471117 PRG3Q9Y2Y8 225 aaPredicted RBP8.79□□□□□ -1
FDPS-209ENST00000471117 NME7Q9Y5B8 376 aa8.79□□□□□ -1
FDPS-209ENST00000471117 SCINQ9Y6U3 715 aa8.79□□□□□ -1
FDPS-209ENST00000471117 VWA8A3KMH1 1905 aa8.79□□□□□ -1
FDPS-209ENST00000471117 ZNF462Q96JM2 2506 aa8.79□□□□□ -1
FDPS-209ENST00000471117 SPEGQ15772 3267 aa8.78□□□□□ -1
FDPS-209ENST00000471117 IGSF10Q6WRI0 2623 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TCRBV5S1A1TA0A578 114 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TMEM191CA6NGB0 347 aa8.78□□□□□ -1
FDPS-209ENST00000471117 A8MXQ7 604 aa8.78□□□□□ -1
FDPS-209ENST00000471117 M0QZQ0 153 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PGRMC1O00264 195 aaKnown RBP8.78□□□□□ -1
FDPS-209ENST00000471117 STK25O00506 426 aa8.78□□□□□ -1
FDPS-209ENST00000471117 NRP1O14786 923 aa8.78□□□□□ -1
FDPS-209ENST00000471117 HCRTO43612 131 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PROSCO94903 275 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CYP11A1P05108 521 aa8.78□□□□□ -1
FDPS-209ENST00000471117 RB1P06400 928 aa8.78□□□□□ -1
FDPS-209ENST00000471117 GALTP07902 379 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TYMPP19971 482 aa8.78□□□□□ -1
FDPS-209ENST00000471117 IGFBP6P24592 240 aaPredicted RBP8.78□□□□□ -1
FDPS-209ENST00000471117 DNAJB1P25685 340 aa8.78□□□□□ -1
FDPS-209ENST00000471117 LMO2P25791 158 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CTNNA2P26232 953 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PMLP29590 882 aa8.78□□□□□ -1
FDPS-209ENST00000471117 SLC1A1P43005 524 aa8.78□□□□□ -1
FDPS-209ENST00000471117 GPD2P43304 727 aa8.78□□□□□ -1
FDPS-209ENST00000471117 BRCC3P46736 316 aa8.78□□□□□ -1
FDPS-209ENST00000471117 MARCKSL1P49006 195 aa8.78□□□□□ -1
FDPS-209ENST00000471117 SLC11A1P49279 550 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ALDH7A1P49419 539 aaKnown RBP8.78□□□□□ -1
FDPS-209ENST00000471117 PEX5P50542 639 aa8.78□□□□□ -1
FDPS-209ENST00000471117 BCAR1P56945 870 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PSMC1P62191 440 aaKnown RBP8.78□□□□□ -1
FDPS-209ENST00000471117 ELAVL2Q12926 359 aaKnown RBP8.78□□□□□ -1
FDPS-209ENST00000471117 ZNF268Q14587 947 aaPredicted RBP8.78□□□□□ -1
FDPS-209ENST00000471117 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
FDPS-209ENST00000471117 N4BP2L1Q5TBK1 243 aaPredicted RBP8.78□□□□□ -1
FDPS-209ENST00000471117 DCAF12L1Q5VU92 463 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ARHGAP17Q68EM7 881 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CD300LGQ6UXG3 332 aa8.78□□□□□ -1
FDPS-209ENST00000471117 OSTM1Q86WC4 334 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CRYBG2Q8N1P7 616 aa8.78□□□□□ -1
FDPS-209ENST00000471117 THEM5Q8N1Q8 247 aa8.78□□□□□ -1
FDPS-209ENST00000471117 RASGEF1CQ8N431 466 aa8.78□□□□□ -1
FDPS-209ENST00000471117 C12orf29Q8N999 325 aa8.78□□□□□ -1
FDPS-209ENST00000471117 MSANTD4Q8NCY6 345 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CD101Q93033 1021 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PPP2R3CQ969Q6 453 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ZNF689Q96CS4 500 aaPredicted RBP8.78□□□□□ -1
FDPS-209ENST00000471117 C18orf8Q96DM3 657 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TNIP3Q96KP6 325 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CPXM1Q96SM3 734 aa8.78□□□□□ -1
FDPS-209ENST00000471117 LPIN3Q9BQK8 851 aa8.78□□□□□ -1
FDPS-209ENST00000471117 RTP3Q9BQQ7 232 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PARD6BQ9BYG5 372 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CARD9Q9H257 536 aa8.78□□□□□ -1
FDPS-209ENST00000471117 DPEP3Q9H4B8 488 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CWH43Q9H720 699 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ANKZF1Q9H8Y5 726 aa8.78□□□□□ -1
FDPS-209ENST00000471117 RBM12Q9NTZ6 932 aaKnown RBP8.78□□□□□ -1
FDPS-209ENST00000471117 FAM49BQ9NUQ9 324 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
FDPS-209ENST00000471117 CDH22Q9UJ99 828 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ADAM28Q9UKQ2 775 aa8.78□□□□□ -1
FDPS-209ENST00000471117 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
FDPS-209ENST00000471117 STRIP2Q9ULQ0 834 aa8.78□□□□□ -1
FDPS-209ENST00000471117 PCDHB8Q9UN66 801 aa8.78□□□□□ -1
FDPS-209ENST00000471117 SF3B1O75533 1304 aaKnown RBP eCLIP8.78□□□□□ -15e-7■■■■■ 28.6
FDPS-209ENST00000471117 BPTFQ12830 3046 aa8.78□□□□□ -1
FDPS-209ENST00000471117 ASPMQ8IZT6 3477 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 CCDC66A2RUB6 948 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 C2CD4DB7Z1M9 353 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 C5orf67F2Z3F1 127 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 GOLGA8SH3BPF8 625 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 I3L4J1 428 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 TAF4O00268 1085 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 GABRDO14764 452 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 PER2O15055 1255 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 ERBB2P04626 1255 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 ITGB1P05556 798 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 SETSIPP0DME0 302 aa8.77□□□□□ -1.01
FDPS-209ENST00000471117 H2AFXP16104 143 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms