RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 SYNPOQ8N3V7 929 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 SPEM1Q8N4L4 309 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 OVCA2Q8WZ82 227 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 CNTNAP3BQ96NU0 1288 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 CNTNAP3Q9BZ76 1288 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
CCNL1-213ENST00000471044 ARHGAP26Q9UNA1 814 aa13.24□□□□□ -0.29
CCNL1-213ENST00000471044 RALGAPA1Q6GYQ0 2036 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 ZNF840PA6NDX5 716 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 TRDMT1O14717 391 aaKnown RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 CETN3O15182 167 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 PAPSS2O95340 614 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SMC2O95347 1197 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 OLFM2O95897 454 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 ARSAP15289 507 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 YWHAQP27348 245 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 GTF2H1P32780 548 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 CXCL12P48061 93 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 GCLMP48507 274 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 NRLP54845 237 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SLC7A9P82251 487 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 AMPD2Q01433 879 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 TAF10Q12962 218 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 KRT39Q6A163 491 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 ELOA2Q8IYF1 753 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SUMF1Q8NBK3 374 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 PRR7Q8TB68 274 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 TAS1R2Q8TE23 839 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 ATRIPQ8WXE1 791 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 CHFRQ96EP1 664 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 SLITRK1Q96PX8 696 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 GTPBP4Q9BZE4 634 aaKnown RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 CYP3A43Q9HB55 503 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 APOBEC3GQ9HC16 384 aaKnown RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
CCNL1-213ENST00000471044 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 PCDHA5Q9Y5H7 936 aa13.23□□□□□ -0.29
CCNL1-213ENST00000471044 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 TNFRSF10BO14763 440 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
CCNL1-213ENST00000471044 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
CCNL1-213ENST00000471044 IFNAR2P48551 515 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 ZXDBP98169 803 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 SATB1Q01826 763 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 EML3Q32P44 896 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 TMEM196Q5HYL7 178 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 ZC3H3Q8IXZ2 948 aaKnown RBP13.22□□□□□ -0.29
CCNL1-213ENST00000471044 FUKQ8N0W3 1084 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 DCLK2Q8N568 766 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 ZMIZ2Q8NF64 920 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 FAXDC2Q96IV6 333 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 KCNK16Q96T55 309 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 TSG101Q99816 390 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 RNF38Q9H0F5 515 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 MMRN2Q9H8L6 949 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
CCNL1-213ENST00000471044 HMGXB4Q9UGU5 601 aa13.22□□□□□ -0.29
CCNL1-213ENST00000471044 HOOK1Q9UJC3 728 aaKnown RBP13.22□□□□□ -0.29
CCNL1-213ENST00000471044 FAM92AA1XBS5 289 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 LEFTY2O00292 366 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 STX10O60499 249 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 AP1G2O75843 785 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 CCDC130P13994 396 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
CCNL1-213ENST00000471044 GJA4P35212 333 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 SLC5A3P53794 718 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 GRSF1Q12849 480 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCNL1-213ENST00000471044 IFRD2Q12894 506 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-213ENST00000471044 PTPRNQ16849 979 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 FSTL4Q6MZW2 842 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 Q6ZS52 159 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
CCNL1-213ENST00000471044 ATP2A3Q93084 1043 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 FBXO32Q969P5 355 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 EXOC4Q96A65 974 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 TWNKQ96RR1 684 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 HNRNPABQ99729 332 aaKnown RBP13.21□□□□□ -0.29
CCNL1-213ENST00000471044 SMOQ99835 787 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
CCNL1-213ENST00000471044 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms