RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PRPHP41219 470 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 WASP42768 502 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 IFNAR2P48551 515 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 GPR15P49685 360 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 NLRP12P59046 1061 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 OSTNP61366 133 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 SKOR1P84550 965 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 ZXDBP98169 803 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 YWHAHQ04917 246 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 SRSF6Q13247 344 aaKnown RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 GPR17Q13304 367 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 DMP1Q13316 513 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 PRPF4BQ13523 1007 aaKnown RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 EOGTQ5NDL2 527 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 CDCA2Q69YH5 1023 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 CAPRIN2Q6IMN6 1127 aaKnown RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 IL27RAQ6UWB1 636 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 SPNS3Q6ZMD2 512 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 ITIH5Q86UX2 942 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 CATSPER3Q86XQ3 398 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 BSNDQ8WZ55 320 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 CALML4Q96GE6 196 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 SEPT5Q99719 369 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 HSD17B14Q9BPX1 270 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 ADPGKQ9BRR6 497 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 KIF9Q9HAQ2 790 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 PRMT7Q9NVM4 692 aaPredicted RBP6.3□□□□□ -1.4
VARS-222ENST00000470953 PCDHB8Q9UN66 801 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 KIAA1024Q9UPX6 916 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 ANK1P16157 1881 aa6.3□□□□□ -1.4
VARS-222ENST00000470953 RTTNQ86VV8 2226 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 ARID1BQ8NFD5 2236 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 ARHGAP10A1A4S6 786 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CCDC169A6NNP5 214 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 PP2D1A8MPX8 630 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 M0QZQ0 153 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 TBCAO75347 108 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 KAT7O95251 611 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 NADKO95544 446 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 KRT7P08729 469 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 C1SP09871 688 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CDK4P11802 303 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
VARS-222ENST00000470953 MUTP22033 750 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 UBA7P41226 1012 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 TNFSF9P41273 254 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 MATR3P43243 847 aaKnown RBP eCLIP6.29□□□□□ -1.4
VARS-222ENST00000470953 CSNK1EP49674 416 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 ATP2C1P98194 919 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 INSM1Q01101 510 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 KDSRQ06136 332 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 USP4Q13107 963 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 ZNF268Q14587 947 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 FAM187BQ17R55 369 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 KIF19Q2TAC6 998 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 DCAF6Q58WW2 860 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 KCNT1Q5JUK3 1230 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 WDR45BQ5MNZ6 344 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 SYCP2LQ5T4T6 812 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 NT5DC1Q5TFE4 455 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 SDHAF4Q5VUM1 108 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 LAYNQ6UX15 382 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 MON1AQ86VX9 555 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 OR10T2Q8NGX3 314 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 C1orf216Q8TAB5 229 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CCDC26Q8TAB7 109 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 PDCD6IPQ8WUM4 868 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 DNASE2BQ8WZ79 361 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 KIFAP3Q92845 792 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 SGF29Q96ES7 293 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CNDP2Q96KP4 475 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 PRIMPOLQ96LW4 560 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 DRC1Q96MC2 740 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 GCNAQ96QF7 691 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CCNL2Q96S94 520 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 MMS19Q96T76 1030 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CCDC113Q9H0I3 377 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 THSD1Q9NS62 852 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 CUEDC1Q9NWM3 386 aaPredicted RBP6.29□□□□□ -1.4
VARS-222ENST00000470953 TUBGCP4Q9UGJ1 667 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 NUMA1Q14980 2115 aa6.29□□□□□ -1.4
VARS-222ENST00000470953 RP1L1Q8IWN7 2480 aaPredicted RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 A0A0A0MRY4 1105 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 ACKR2O00590 384 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 PCDHGA12O60330 932 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 SYNCRIPO60506 623 aaKnown RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 RTN2O75298 545 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 FAM155BO75949 473 aa6.28□□□□□ -1.4
VARS-222ENST00000470953 LDOC1O95751 146 aaPredicted RBP6.28□□□□□ -1.4
VARS-222ENST00000470953 DDAH2O95865 285 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms