RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TRAPPC3O43617 180 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 SRGAP2O75044 1071 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PAGE1O75459 146 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ATP5HO75947 161 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CIAO1O76071 339 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 RB1P06400 928 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GALTP07902 379 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 HMOX1P09601 288 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PABPC1P11940 636 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 KRT3P12035 628 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 HSD3B1P14060 373 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CCND1P24385 295 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PTX3P26022 381 aaPredicted RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TYK2P29597 1187 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 HLA-FP30511 346 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 SHMT1P34896 483 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 MAGEA11P43364 429 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 DIO1P49895 249 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PEX3P56589 373 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TAP1Q03518 808 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 SSRP1Q08945 709 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GALNT3Q14435 633 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CYTH1Q15438 398 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TAF12Q16514 161 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 HADHQ16836 314 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ALG11Q2TAA5 492 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC58Q4VC31 144 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ATP13A4Q4VNC1 1196 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TTMPQ5BVD1 217 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GTF2IRD2BQ6EKJ0 949 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ZSCAN25Q6NSZ9 544 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CNNM4Q6P4Q7 775 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 C16orf86Q6ZW13 317 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 UTS2BQ765I0 119 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TTC6Q86TZ1 520 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GTF2IRD2Q86UP8 949 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CHD1LQ86WJ1 897 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 LRRC6Q86X45 466 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 VPS37DQ86XT2 251 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 MMAAQ8IVH4 418 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ANKRD35Q8N283 1001 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ATP6V0D2Q8N8Y2 350 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CEP76Q8TAP6 659 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 LPPQ93052 612 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GRAMD1AQ96CP6 724 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 RMND5BQ96G75 393 aaPredicted RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF845Q96IR2 970 aaPredicted RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 IFT74Q96LB3 600 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 NECAB3Q96P71 396 aaPredicted RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 MDFIQ99750 246 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 SYT15Q9BQS2 421 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 SPON2Q9BUD6 331 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 DDX23Q9BUQ8 820 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 RSRP1Q9BUV0 290 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 IMPG2Q9BZV3 1241 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 LACRTQ9GZZ8 138 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 NAT10Q9H0A0 1025 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 DPH5Q9H2P9 285 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 EPB41L1Q9H4G0 881 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 MBIPQ9NS73 344 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM260Q9NX78 707 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ZNHIT2Q9UHR6 403 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 GMEB2Q9UKD1 530 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PHTF1Q9UMS5 762 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 PCDHA12Q9UN75 941 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 APOBEC2Q9Y235 224 aaKnown RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 ERGIC3Q9Y282 383 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 DERAQ9Y315 318 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 KLF2Q9Y5W3 355 aaPredicted RBP5.34□□□□□ -1.55
COL3A1-205ENST00000470167 AP1M2Q9Y6Q5 423 aa5.34□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC88BA6NC98 1476 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 BCL9O00512 1426 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 FRMPD4Q14CM0 1322 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 KDM3AQ9Y4C1 1321 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 A0A1B0GVL5 298 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 OR5K3A6NET4 321 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 CFAP73A6NFT4 308 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ADARB2-AS1A8MUL3 147 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 A8MX80 341 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 E9PBE3 544 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 H0Y858 1186 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 H3BM21 787 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 H3BUI4 141 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 NPC1O15118 1278 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 POLR1CO15160 346 aaPredicted RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PFDN6O15212 129 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SSX5O60225 188 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 GRIN3BO60391 1043 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 TLR5O60602 858 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PLA2G6O60733 806 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 SMPD2O60906 423 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ADAM23O75077 832 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 JRKO75564 520 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 WFS1O76024 890 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PDE5AO76074 875 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 UFL1O94874 794 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 PLATP00750 562 aa5.33□□□□□ -1.56
COL3A1-205ENST00000470167 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
COL3A1-205ENST00000470167 IL6P05231 212 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms