RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ECHS1P30084 290 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 PBX3P40426 434 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 ATXN1P54253 815 aaKnown RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 CDH6P55285 790 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 YWHAZP63104 245 aaKnown RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 DYNLT1P63172 113 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 IKBKEQ14164 716 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 PPP1R7Q15435 360 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 FAM153CQ494X1 144 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 DCAF6Q58WW2 860 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 RAB41Q5JT25 222 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 FAM171A1Q5VUB5 890 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 DUPD1Q68J44 220 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SPATA2LQ8IUW3 424 aaPredicted RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 TBCBQ99426 244 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 COLEC11Q9BWP8 271 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 FAM114A2Q9NRY5 505 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 MARCH5Q9NX47 278 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 FAM153AQ9UHL3 310 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SPDYE4A6NLX3 237 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SYN3O14994 580 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 OAZ2O95190 189 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 USP17L7P0C7H9 530 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SULT1E1P49888 294 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 DAOAP59103 153 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 PKN2Q16513 984 aaKnown RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 VARS2Q5ST30 1063 aaKnown RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 CNKSR3Q6P9H4 555 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 HFE2Q6ZVN8 426 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SLCO2A1Q92959 643 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 CAVIN3Q969G5 261 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 NCAPGQ9BPX3 1015 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SNRNP25Q9BV90 132 aaKnown RBP18.95■□□□□ 0.62
SMC4-211ENST00000469858 NEUROG2Q9H2A3 272 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 CNGB3Q9NQW8 809 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 GPATCH2LQ9NWQ4 482 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 SNX24Q9Y343 169 aa18.95■□□□□ 0.62
SMC4-211ENST00000469858 NT5C1B-RDH14C9J2C7 533 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 KRT17Q04695 432 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 TAZQ16635 292 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 SLC39A12Q504Y0 691 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 BOLA3Q53S33 107 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 RFX6Q8HWS3 928 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 LRRC43Q8N309 656 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 EIF1ADQ8N9N8 165 aaKnown RBP18.94■□□□□ 0.62
SMC4-211ENST00000469858 GRK7Q8WTQ7 553 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 CENPIQ92674 756 aaPredicted RBP18.94■□□□□ 0.62
SMC4-211ENST00000469858 B3GALT6Q96L58 329 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 GPR62Q9BZJ7 368 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 UBXN6Q9BZV1 441 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 EFR3BQ9Y2G0 817 aa18.94■□□□□ 0.62
SMC4-211ENST00000469858 MKI67P46013 3256 aaKnown RBP18.94■□□□□ 0.62
SMC4-211ENST00000469858 YJEFN3A6XGL0 299 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 E7ENQ6 273 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 CST8O60676 142 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 MMRN1Q13201 1228 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 KRT81Q14533 505 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 SLC25A52Q3SY17 297 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 ZC3H12AQ5D1E8 599 aaKnown RBP18.93■□□□□ 0.62
SMC4-211ENST00000469858 ATL2Q8NHH9 583 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 ZBTB9Q96C00 473 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 ZCWPW1Q9H0M4 648 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 POPDC2Q9HBU9 364 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 PRDM5Q9NQX1 630 aaPredicted RBP18.93■□□□□ 0.62
SMC4-211ENST00000469858 CALCOCO1Q9P1Z2 691 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 SF3B1O75533 1304 aaKnown RBP eCLIP18.93■□□□□ 0.621e-7■■■■■ 165.2
SMC4-211ENST00000469858 LIASO43766 372 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 GAS8O95995 478 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 ZBED1O96006 694 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 GALTP07902 379 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 NOS2P35228 1153 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 PITX1P78337 314 aaPredicted RBP18.93■□□□□ 0.62
SMC4-211ENST00000469858 DPYSL3Q14195 570 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 FUT10Q6P4F1 479 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 STRADAQ7RTN6 431 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 TEKT4Q8WW24 435 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.93■□□□□ 0.621e-8■■■■■ 268.2
SMC4-211ENST00000469858 VWCEQ96DN2 955 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 TMEM175Q9BSA9 504 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 ABI2Q9NYB9 513 aaPredicted RBP18.93■□□□□ 0.62
SMC4-211ENST00000469858 FEZ2Q9UHY8 353 aaPredicted RBP18.93■□□□□ 0.62
SMC4-211ENST00000469858 DNPEPQ9ULA0 475 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 STAP1Q9ULZ2 295 aa18.93■□□□□ 0.62
SMC4-211ENST00000469858 CAPN9O14815 690 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 CYP2F1P24903 491 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 RPL21P46778 160 aaKnown RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 ARSEP51690 589 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 NNTQ13423 1086 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 CTXN3Q4LDR2 81 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 SYPL2Q5VXT5 272 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 BBS12Q6ZW61 710 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 DCP1BQ8IZD4 617 aaKnown RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 SLC2A13Q96QE2 648 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 SAE1Q9UBE0 346 aaPredicted RBP18.92■□□□□ 0.62
SMC4-211ENST00000469858 NAALADL1Q9UQQ1 740 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 LTBP2Q14767 1821 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 MYO16Q9Y6X6 1858 aa18.92■□□□□ 0.62
SMC4-211ENST00000469858 SYNJ2BP-COX16A0A087WUM0 186 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms