RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 USP36Q9P275 1121 aaKnown RBP11.36□□□□□ -0.59
TRAIP-202ENST00000469027 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
TRAIP-202ENST00000469027 SETD2Q9BYW2 2564 aaPredicted RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 ANAPC1Q9H1A4 1944 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 A0A1B0GTQ1 180 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 CPLX1O14810 134 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 PPEF2O14830 753 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 USP12O75317 370 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 PPFIA2O75334 1257 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 ITGB6P18564 788 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 GRIK1P39086 918 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 RPL10AP62906 217 aaKnown RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 ZXDBP98169 803 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 SLC10A6Q3KNW5 377 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 GRAMD4Q6IC98 578 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 SLFN12Q8IYM2 578 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 CACTIN-AS1Q8N1I8 211 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 TRMT2BQ96GJ1 504 aaKnown RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 GABRG3Q99928 467 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 NUP58Q9BVL2 599 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 ITM2CQ9NQX7 267 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
TRAIP-202ENST00000469027 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 DSEQ9UL01 958 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 HCN2Q9UL51 889 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 CPQQ9Y646 472 aa11.35□□□□□ -0.59
TRAIP-202ENST00000469027 WNT7AO00755 349 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 TRIM24O15164 1050 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 PAPSS1O43252 624 aaPredicted RBP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 DTNBO60941 627 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 NOL4O94818 638 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 CXCL8P10145 99 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 PSMA5P28066 241 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 CTSKP43235 329 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 INHBCP55103 352 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 LILRA4P59901 499 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 STK3Q13188 491 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 ORC1Q13415 861 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 FUT11Q495W5 492 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 KCNT1Q5JUK3 1230 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 USP53Q70EK8 1073 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 NAP1L4Q99733 375 aaKnown RBP11.34□□□□□ -0.59
TRAIP-202ENST00000469027 EPN3Q9H201 632 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 POLR1BQ9H9Y6 1135 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 LRBAP50851 2863 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
TRAIP-202ENST00000469027 ARHGEF35A5YM69 484 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 CCDC169A6NNP5 214 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ABL1P00519 1130 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 CKMT2P17540 419 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 RBMS1P29558 406 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 MATR3P43243 847 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 LSSP48449 732 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 FOXK1P85037 733 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 TSPY1Q01534 308 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 NR5A1Q13285 461 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ARL13BQ3SXY8 428 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 PTRH1Q86Y79 214 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 SCN4BQ8IWT1 228 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ETFBKMTQ8IXQ9 262 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 PRCCQ92733 491 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 TNFRSF25Q93038 417 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ELF4Q99607 663 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 PTPRHQ9HD43 1115 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 TMLHEQ9NVH6 421 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 DNAJC17Q9NVM6 304 aaKnown RBP11.33□□□□□ -0.6
TRAIP-202ENST00000469027 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 PCDHA12Q9UN75 941 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 STARD13Q9Y3M8 1113 aa11.33□□□□□ -0.6
TRAIP-202ENST00000469027 TP53BP1Q12888 1972 aaPredicted RBP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 NUMA1Q14980 2115 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CYB561D2O14569 222 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 FSBPO95073 299 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CYP11A1P05108 521 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 XRCC6P12956 609 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CYP3A5P20815 502 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 CYP2F1P24903 491 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
TRAIP-202ENST00000469027 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms