RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SMOQ99835 787 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 NDRG2Q9UN36 371 aaKnown RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 PMM2O15305 246 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 OAS1P00973 400 aaKnown RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 FAM200BP0CF97 657 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SLC7A9P82251 487 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 RUNX3Q13761 415 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 CCDC40Q4G0X9 1142 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SNX30Q5VWJ9 437 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 ALYREFQ86V81 257 aaKnown RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 KIAA1958Q8N8K9 716 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 FBXO32Q969P5 355 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 CYFIP2Q96F07 1278 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 CHRDQ9H2X0 955 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SAMSN1Q9NSI8 373 aaKnown RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
COL27A1-203ENST00000468565 GNA14O95837 355 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 ADORA2BP29275 332 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 SOX9P48436 509 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 FMO5P49326 533 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 IFRD2Q12894 506 aaPredicted RBP15.28■□□□□ 0.04
COL27A1-203ENST00000468565 TBX2Q13207 712 aaPredicted RBP15.28■□□□□ 0.04
COL27A1-203ENST00000468565 HSP90AA4PQ58FG1 418 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 MAMSTRQ6ZN01 415 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 OSCP1Q8WVF1 389 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 MED15Q96RN5 788 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 PNPLA8Q9NP80 782 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
COL27A1-203ENST00000468565 CTIFO43310 598 aaKnown RBP15.27■□□□□ 0.04
COL27A1-203ENST00000468565 LAMTOR5O43504 91 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 BEST1O76090 585 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 CHRNB1P11230 501 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 TUBP50607 506 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.04
COL27A1-203ENST00000468565 MAP3K7CLP57077 242 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 LRRC32Q14392 662 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 ZNF528Q3MIS6 628 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 FILIP1LQ4L180 1135 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 CLEC20AQ6ZU45 233 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 KIF18AQ8NI77 898 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 SCAMP5Q8TAC9 235 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 TTC8Q8TAM2 541 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 TATDN2Q93075 761 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 PPP1R13BQ96KQ4 1090 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 EBF3Q9H4W6 596 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 LMAN1LQ9HAT1 526 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 KIAA1549LQ6ZVL6 1849 aa15.27■□□□□ 0.04
COL27A1-203ENST00000468565 A0A1B0GTH6 734 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 P4HA2O15460 535 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 SP9P0CG40 484 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 IFNAR2P48551 515 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 AMPD2Q01433 879 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 CUL2Q13617 745 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 NR1I3Q14994 352 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 TRIM68Q6AZZ1 485 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 TXNDC11Q6PKC3 985 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 MAML2Q8IZL2 1156 aaPredicted RBP15.27■□□□□ 0.03
COL27A1-203ENST00000468565 TMEM176AQ96HP8 235 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 ARID3AQ99856 593 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 RNF38Q9H0F5 515 aa15.27■□□□□ 0.03
COL27A1-203ENST00000468565 DUS2Q9NX74 493 aaKnown RBP15.27■□□□□ 0.03
COL27A1-203ENST00000468565 MYO15AQ9UKN7 3530 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 MYOFQ9NZM1 2061 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 HHLA1C9JL84 531 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 ABL1P00519 1130 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 TBXAS1P24557 533 aaPredicted RBP15.26■□□□□ 0.03
COL27A1-203ENST00000468565 RAD23BP54727 409 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 STX17P56962 302 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 YWHAEP62258 255 aaKnown RBP15.26■□□□□ 0.03
COL27A1-203ENST00000468565 SYCP1Q15431 976 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 ZNF394Q53GI3 561 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 CDKAL1Q5VV42 579 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 CPA6Q8N4T0 437 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 SLC4A11Q8NBS3 891 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 DUSP16Q9BY84 665 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 PRMT8Q9NR22 394 aaPredicted RBP15.26■□□□□ 0.03
COL27A1-203ENST00000468565 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
COL27A1-203ENST00000468565 LEFTY2O00292 366 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 ARHGAP6O43182 974 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 FGFR1OPO95684 399 aaKnown RBP15.25■□□□□ 0.03
COL27A1-203ENST00000468565 ARSAP15289 507 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 ZXDBP98169 803 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 CETN1Q12798 172 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 MTAPQ13126 283 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 EML3Q32P44 896 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 HECTD3Q5T447 861 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 PPP1R26Q5T8A7 1209 aaPredicted RBP15.25■□□□□ 0.03
COL27A1-203ENST00000468565 ARHGAP17Q68EM7 881 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL27A1-203ENST00000468565 TRIM59Q8IWR1 403 aa15.25■□□□□ 0.03
COL27A1-203ENST00000468565 ATP2A3Q93084 1043 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms