RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 C11orf96Q7Z7L8 435 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 RAB11FIP4Q86YS3 637 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 TERB1Q8NA31 727 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 DDB2Q92466 427 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 SNX18Q96RF0 628 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 MMS19Q96T76 1030 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 SENP7Q9BQF6 1050 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 BRIP1Q9BX63 1249 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 INO80BQ9C086 356 aaPredicted RBP4.49□□□□□ -1.69
VPS50-209ENST00000467326 CIPCQ9C0C6 399 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 FLRT1Q9NZU1 646 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 SWAP70Q9UH65 585 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 AMFRQ9UKV5 643 aa4.49□□□□□ -1.69
VPS50-209ENST00000467326 RHPN2P1A8MT19 583 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 TISP43B9A030 160 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 M0R3H8 397 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 CES2O00748 559 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 USP1O94782 785 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 NHLRC4P0CG21 123 aaPredicted RBP4.48□□□□□ -1.69
VPS50-209ENST00000467326 CDK4P11802 303 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 RENBPP51606 427 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 HOXA4Q00056 320 aaPredicted RBP4.48□□□□□ -1.69
VPS50-209ENST00000467326 GRM1Q13255 1194 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 DAG1Q14118 895 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 EZH2Q15910 746 aaKnown RBP4.48□□□□□ -1.69
VPS50-209ENST00000467326 RNASE12Q5GAN4 147 aaKnown RBP4.48□□□□□ -1.69
VPS50-209ENST00000467326 ZNF66Q6ZN08 573 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 FAM9BQ8IZU0 186 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 SAMD3Q8N6K7 520 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 PHKBQ93100 1093 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 IQCDQ96DY2 449 aa4.48□□□□□ -1.69
VPS50-209ENST00000467326 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 PMPCBO75439 489 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 IL18RAPO95256 599 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 ANXA2P07355 339 aaKnown RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 PARP1P09874 1014 aaKnown RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 MYCLP12524 364 aaPredicted RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 TIRAPP58753 221 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 TUBA4AP68366 448 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 HTRA4P83105 476 aaPredicted RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 PSG6Q00889 435 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 KCNAB1Q14722 419 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 MAP9Q49MG5 647 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 KIAA1614Q5VZ46 1190 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 PLAG1Q6DJT9 500 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 MZT2AQ6P582 158 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 SERPINA13PQ6UXR4 307 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 PTCHD4Q6ZW05 846 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 SFTPA1Q8IWL2 248 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 SDR16C5Q8N3Y7 309 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 WDYHV1Q96HA8 205 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 ZBTB45Q96K62 511 aaPredicted RBP4.47□□□□□ -1.69
VPS50-209ENST00000467326 ZCWPW1Q9H0M4 648 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 TRIM36Q9NQ86 728 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 SNX15Q9NRS6 342 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 TFCP2L1Q9NZI6 479 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 DKK4Q9UBT3 224 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 RIMKLBQ9ULI2 386 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 FAM50BQ9Y247 325 aa4.47□□□□□ -1.69
VPS50-209ENST00000467326 AGPSO00116 658 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 EXOC5O00471 708 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 KPNA5O15131 536 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 LDHAP00338 332 aaKnown RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 FGAP02671 866 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 A1BGP04217 495 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 MYL1P05976 194 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 CELA2AP08217 269 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 RBL1P28749 1068 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 EPHB2P29323 1055 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 GNALP38405 381 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 ABCG1P45844 678 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 GATMP50440 423 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 DHX8Q14562 1220 aaKnown RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 RNF44Q7L0R7 432 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 BCDIN3DQ7Z5W3 292 aaKnown RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 CHSY1Q86X52 802 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 LIX1LQ8IVB5 337 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 CCDC33Q8N5R6 958 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 PAF1Q8N7H5 531 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 PPM1EQ8WY54 764 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 RITA1Q96K30 269 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 ASB2Q96Q27 587 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 SARGQ9BW04 601 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 SEMA4CQ9C0C4 833 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 HEYLQ9NQ87 328 aaPredicted RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 TBC1D23Q9NUY8 699 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 DNAJB11Q9UBS4 358 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 LPAR3Q9UBY5 353 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 ANAPC4Q9UJX5 808 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 FBXO9Q9UK97 447 aaPredicted RBP4.46□□□□□ -1.7
VPS50-209ENST00000467326 HPSEQ9Y251 543 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 KAT6AQ92794 2004 aa4.46□□□□□ -1.7
VPS50-209ENST00000467326 POM121BA6NF01 834 aa4.45□□□□□ -1.7
VPS50-209ENST00000467326 PRRT4C9JH25 899 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms