RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MARK4Q96L34 752 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 LRGUKQ96M69 825 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 TAAR9Q96RI9 348 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 TMEM184CQ9NVA4 438 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 DNMT3BQ9UBC3 853 aaKnown RBP4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 ZNF180Q9UJW8 692 aa4.77□□□□□ -1.65
CHMP2B-202ENST00000466696 MBD3L4A6NDZ8 208 aaPredicted RBP4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 MBD3L3A6NE82 208 aaPredicted RBP4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 CD8B2A6NJW9 211 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 CNOT3O75175 753 aaKnown RBP4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 ME1P48163 572 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 CFHR3Q02985 330 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 CFHR1Q03591 330 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 TTF1Q15361 905 aaPredicted RBP4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 ZDHHC24Q6UX98 284 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 NPNTQ6UXI9 565 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 OR56A3Q8NH54 315 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 MAML1Q92585 1016 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 ATP6V0A4Q9HBG4 840 aa4.76□□□□□ -1.65
CHMP2B-202ENST00000466696 TBX3O15119 743 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 TUSC2O75896 110 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 CTSAP10619 480 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 CD19P15391 556 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 ATF7P17544 494 aaPredicted RBP4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 KLRC1P26715 233 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 THBS4P35443 961 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 GATMP50440 423 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 HSF1Q00613 529 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 MCL1Q07820 350 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 SEC23BQ15437 767 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 LEXMQ3ZCV2 418 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 CC2D1BQ5T0F9 858 aaKnown RBP4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 MAEAQ7L5Y9 396 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 UBE2Q1Q7Z7E8 422 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 PIM3Q86V86 326 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 CHPFQ8IZ52 775 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 ZBTB34Q8NCN2 500 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 ADAMTS15Q8TE58 950 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 WWOXQ9NZC7 414 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 HEY2Q9UBP5 337 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 NKX1-2Q9UD57 310 aaPredicted RBP4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 HS3ST3B1Q9Y662 390 aa4.75□□□□□ -1.65
CHMP2B-202ENST00000466696 TRIM43BA6NCK2 446 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 CAPN8A6NHC0 703 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 H3BNX3 289 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 H7C4K7 107 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 PYCARD-AS1I3L0S3 204 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 EXOC5O00471 708 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 AKAP10O43572 662 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 RRP9O43818 475 aaKnown RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 RASSF9O75901 435 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 CYP19A1P11511 503 aaPredicted RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 PTDSS1P48651 473 aaKnown RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 PGDP52209 483 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 SLC9C1Q4G0N8 1177 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 KCTD20Q7Z5Y7 419 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 MICU3Q86XE3 530 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 TPH2Q8IWU9 490 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 C12orf76Q8N812 135 aaPredicted RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 TRIM43Q96BQ3 446 aaPredicted RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 WDYHV1Q96HA8 205 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 HIC2Q96JB3 615 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 ZFYVE19Q96K21 471 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 ZBTB45Q96K62 511 aaPredicted RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 TRMOQ9BU70 441 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 B3GNT5Q9BYG0 378 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 DHX36Q9H2U1 1008 aaKnown RBP4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
CHMP2B-202ENST00000466696 CCDC187A0A096LP49 1063 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 A8MVJ9 347 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 CLIC1O00299 241 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 TULP3O75386 442 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 RFPL1O75677 317 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 PIAS2O75928 621 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 CRYABP02511 175 aaKnown RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 PSG1P11464 419 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 THBS3P49746 956 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 ARHGEF7Q14155 803 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 MFSD13AQ14CX5 517 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 NPY5RQ15761 445 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 ST3GAL2Q16842 350 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 ZNF750Q32MQ0 723 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 C9orf47Q6ZRZ4 202 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 EPM2AIP1Q7L775 607 aaPredicted RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 OVCH2Q7RTZ1 564 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 PNPLA1Q8N8W4 532 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 SMCR8Q8TEV9 937 aaPredicted RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 NMD3Q96D46 503 aaKnown RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 ZNF668Q96K58 619 aaPredicted RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 LYZL4Q96KX0 146 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 RTFDC1Q9BY42 306 aaPredicted RBP4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 TMEM60Q9H2L4 133 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 SACM1LQ9NTJ5 587 aa4.73□□□□□ -1.65
CHMP2B-202ENST00000466696 LRP12Q9Y561 859 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms