RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MYCBPAPQ8TBZ2 947 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SSH3Q8TE77 659 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 CACTINQ8WUQ7 758 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 OVCA2Q8WZ82 227 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 RUBCNQ92622 972 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 GLG1Q92896 1179 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 FKBP10Q96AY3 582 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 TTPALQ9BTX7 342 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 KCTD5Q9NXV2 234 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 C9orf78Q9NZ63 289 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 EHD3Q9NZN3 535 aa5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 TESQ9UGI8 421 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 SRP68Q9UHB9 627 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 LRRFIP2Q9Y608 721 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-211ENST00000466538 FER1L4A9Z1Z3 1794 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 UNC119BA6NIH7 251 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 C1QTNF3-AMACRE9PGA6 284 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 J3KTA2 159 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 AGPSO00116 658 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 EXOC5O00471 708 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 KIAA0355O15063 1070 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 YY2O15391 372 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 MPPED1O15442 326 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 PEX1O43933 1283 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 CBFA2T3O75081 653 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 NXPH3O95157 252 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 NTSR1P30989 418 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADD2P35612 726 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 LIPAP38571 399 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 DGKQP52824 942 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 FOXE3Q13461 319 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 TUBA3CQ13748 450 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 TBCCQ15814 346 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 ST3GAL2Q16842 350 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 TIGD6Q17RP2 521 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 KIAA0895LQ68EN5 471 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 LIN54Q6MZP7 749 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 RINT1Q6NUQ1 792 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 NFRKBQ6P4R8 1299 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 MTHFD1LQ6UB35 978 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 RAB11FIP2Q7L804 512 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 MOGAT3Q86VF5 341 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 PAF1Q8N7H5 531 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 TOR1AIP2Q8NFQ8 470 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 ZNF503Q96F45 646 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 UBXN10Q96LJ8 280 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 HAPLN3Q96S86 360 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 EPS8L2Q9H6S3 715 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 NRDE2Q9H7Z3 1164 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 LPAR3Q9UBY5 353 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 GJD2Q9UKL4 321 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 RIMKLBQ9ULI2 386 aa5.04□□□□□ -1.6
CDC42BPA-211ENST00000466538 ADGRA2Q96PE1 1338 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 WDR27A2RRH5 827 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 A8MVJ9 347 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 TAF5LO75529 589 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 WDR47O94967 919 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 DLDP09622 509 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 C1SP09871 688 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 ITGAMP11215 1152 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 HTR7P34969 479 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MAPK9P45984 424 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 PNLIPRP1P54315 467 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 EIF4A1P60842 406 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 GRM4Q14833 912 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 TAF5Q15542 800 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 TBC1D25Q3MII6 688 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MIIPQ5JXC2 388 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 TREML2Q5T2D2 321 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 ANKRD45Q5TZF3 282 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 KCNV1Q6PIU1 500 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MMS22LQ6ZRQ5 1243 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MRGPREQ86SM8 312 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 FTSJ3Q8IY81 847 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 NGDNQ8NEJ9 315 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 OR1N1Q8NGS0 311 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 RP9Q8TA86 221 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 THAP4Q8WY91 577 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 USP13Q92995 863 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 VPS50Q96JG6 964 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 Q96MF0 132 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 PAAF1Q9BRP4 392 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 AIFM2Q9BRQ8 373 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MAF1Q9H063 256 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 SERHL2Q9H4I8 314 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 MLXIPQ9HAP2 919 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 SEPSECSQ9HD40 501 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 SAGE1Q9NXZ1 904 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 GABRQQ9UN88 632 aa5.03□□□□□ -1.6
CDC42BPA-211ENST00000466538 CCDC151A5D8V7 595 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 HMX3A6NHT5 357 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PMPCBO75439 489 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 TJP3O95049 919 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 LARGE1O95461 756 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 PDHA1P08559 390 aa5.02□□□□□ -1.61
CDC42BPA-211ENST00000466538 IL6RP08887 468 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms