RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 SEMA4DQ92854 862 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 MRPL45Q9BRJ2 306 aaKnown RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
PMF1-204ENST00000466489 TRIM10Q9UDY6 481 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 CAPN6Q9Y6Q1 641 aa10.53□□□□□ -0.72
PMF1-204ENST00000466489 PTPRDP23468 1912 aa10.52□□□□□ -0.72
PMF1-204ENST00000466489 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 CCDC195A0A1B0GUA6 201 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 MTMR11A4FU01 709 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 ANKRD62A6NC57 917 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 H0YHG0 523 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 H3BQ06 376 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 POU2F2P09086 479 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 OR4Q2P0C623 313 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 GZMAP12544 262 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 PTPN1P18031 435 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 PON1P27169 355 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 CHRNA3P32297 505 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 SOX5P35711 763 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 MDH1P40925 334 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 RAP1GAPP47736 663 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 CDH8P55286 799 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 SLC8A3P57103 927 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 C2orf54Q08AI8 447 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 KCNC3Q14003 757 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 HLTFQ14527 1009 aaKnown RBP eCLIP10.52□□□□□ -0.73
PMF1-204ENST00000466489 MGAT5BQ3V5L5 792 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 LEXMQ3ZCV2 418 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 RARS2Q5T160 578 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 RSPO2Q6UXX9 243 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 TAOK1Q7L7X3 1001 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 OSTM1Q86WC4 334 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 GBP7Q8N8V2 638 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 SMRP1Q8NCR6 262 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 BBOF1Q8ND07 529 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 IFT81Q8WYA0 676 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 SEPT5Q99719 369 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 MED10Q9BTT4 135 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 ELOVL4Q9GZR5 314 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 ADAM7Q9H2U9 754 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 CISHQ9NSE2 258 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 RBM12Q9NTZ6 932 aaKnown RBP10.52□□□□□ -0.73
PMF1-204ENST00000466489 EHD2Q9NZN4 543 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 APEX2Q9UBZ4 518 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 INSL5Q9Y5Q6 135 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 DUSP10Q9Y6W6 482 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 C2orf16Q68DN1 1984 aa10.52□□□□□ -0.73
PMF1-204ENST00000466489 GMNCA6NCL1 334 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 AGPSO00116 658 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 TRIM66O15016 1216 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 ZNF185O15231 689 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CEP104O60308 925 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CILPO75339 1184 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 NOL4O94818 638 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 FGF19O95750 216 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 KRT5P13647 590 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 TNFAIP3P21580 790 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 LMO2P25791 158 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CTNNA1P35221 906 aaKnown RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 LTBRP36941 435 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CETN2P41208 172 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 NDST1P52848 882 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 BPIFB4P59827 614 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 PTK2Q05397 1052 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 DUSP4Q13115 394 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 MDH1BQ5I0G3 518 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 GKAP1Q5VSY0 366 aaPredicted RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 PTCRAQ6ISU1 281 aaPredicted RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 TMC5Q6UXY8 1006 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 MMS22LQ6ZRQ5 1243 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 GPR149Q86SP6 731 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 DAAM2Q86T65 1068 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 C10orf67Q8IYJ2 551 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 LEMD2Q8NC56 503 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 VN1R2Q8NFZ6 395 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 TATDN2Q93075 761 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 MYLPFQ96A32 169 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 SMARCD1Q96GM5 515 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 MSLNLQ96KJ4 702 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 CEP295NLQ96MC4 621 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 ZNF512Q96ME7 567 aaPredicted RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 KRT12Q99456 494 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 RTP3Q9BQQ7 232 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 RHOBTB2Q9BYZ6 727 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 FOXP3Q9BZS1 431 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 NSRP1Q9H0G5 558 aaKnown RBP10.51□□□□□ -0.73
PMF1-204ENST00000466489 GANQ9H2C0 597 aa10.51□□□□□ -0.73
PMF1-204ENST00000466489 PPCSQ9HAB8 311 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms