RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 TSHZ3Q63HK5 1081 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PMS2CLQ68D20 193 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 GALNT18Q6P9A2 607 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 RABEPKQ7Z6M1 372 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 TICAM2Q86XR7 235 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CEP57Q86XR8 500 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 TBC1D10CQ8IV04 446 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CCDC60Q8IWA6 550 aaPredicted RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 LINC01465Q8N7H1 131 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 LEMD2Q8NC56 503 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CCDC26Q8TAB7 109 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PIP4K2CQ8TBX8 421 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 MZB1Q8WU39 189 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 B3GALT6Q96L58 329 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 FCRL2Q96LA5 508 aaPredicted RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 CLSTN3Q9BQT9 956 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CDADC1Q9BWV3 514 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 XYLT2Q9H1B5 865 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 TRPV4Q9HBA0 871 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 C2orf42Q9NWW7 574 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 KLHL14Q9P2G3 628 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 GGT7Q9UJ14 662 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PCDHA6Q9UN73 950 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PCDHA8Q9Y5H6 950 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 TAF6LQ9Y6J9 622 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 HECTD1Q9ULT8 2610 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 NEDD4P46934 1319 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 USP9XQ93008 2570 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 A0A087WZ62 844 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 ERICH2A1L162 156 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 WDR27A2RRH5 827 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 ENO4A6NNW6 628 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 HEPACAM2A8MVW5 462 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 B4E1Z4 1266 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 DDX39AO00148 427 aaKnown RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 ARNTLO00327 626 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 IPO5O00410 1097 aaKnown RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 DCLK1O15075 740 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 CCNE2O96020 404 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 MPOP05164 745 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 FTH1P19P0C7X4 201 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 NME1P15531 152 aaKnown RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 PRKCAP17252 672 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 HOXD12P35452 270 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 ZNF76P36508 570 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 DHPSP49366 369 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 CSRP3P50461 194 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 GFPT1Q06210 699 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 CYP4F3Q08477 520 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 SLC14A1Q13336 389 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 SLC5A9Q2M3M2 681 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 FBXO43Q4G163 708 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 TAF1BQ53T94 588 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 LMBRD2Q68DH5 695 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 PRSS55Q6UWB4 352 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 TEX2Q8IWB9 1127 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 CEP76Q8TAP6 659 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 LNX1Q8TBB1 728 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 PIBF1Q8WXW3 757 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 SLC6A18Q96N87 628 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 TMEM209Q96SK2 561 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 JPH2Q9BR39 696 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 FDXACB1Q9BRP7 624 aaPredicted RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 MKRN2Q9H000 416 aaKnown RBP6.48□□□□□ -1.37
NCL-208ENST00000466274 SLITRK6Q9H5Y7 841 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 TBC1D22BQ9NU19 505 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 AGPAT5Q9NUQ2 364 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 ERVK13-1Q9NX77 482 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 DDX19BQ9UMR2 479 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 PCDHA10Q9Y5I2 948 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 SPTA1P02549 2419 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 LAMA4Q16363 1823 aa6.48□□□□□ -1.37
NCL-208ENST00000466274 TENM4Q6N022 2769 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 ZNF462Q96JM2 2506 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 MYO18BQ8IUG5 2567 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 KALRNO60229 2985 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 ARL5CA6NH57 179 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
NCL-208ENST00000466274 E9PAM4 449 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 ABLIM1O14639 778 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 PRRG1O14668 218 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 CYTH3O43739 400 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 FOSP01100 380 aaPredicted RBP6.47□□□□□ -1.37
NCL-208ENST00000466274 VAV1P15498 845 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 CCNFP41002 786 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 VIPR2P41587 438 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 SOX9P48436 509 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 DGKEP52429 567 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 CYP4F8P98187 520 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 ARHGAP29Q52LW3 1261 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 RTP2Q5QGT7 225 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 LPCAT2Q7L5N7 544 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 NIPA1Q7RTP0 329 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 GPR155Q7Z3F1 870 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 TMC6Q7Z403 805 aa6.47□□□□□ -1.37
NCL-208ENST00000466274 CATIPQ7Z7H3 387 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms