RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 USP33Q8TEY7 942 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 FBXL18Q96ME1 805 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 PANX3Q96QZ0 392 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 REEP2Q9BRK0 252 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 TXLNGQ9NUQ3 528 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 WBP1LQ9NX94 342 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 NFICP08651 508 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 RANBP1P43487 201 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 POU5F1BQ06416 359 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 NSUN2Q08J23 767 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 DMC1Q14565 340 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 TTC29Q8NA56 475 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 FAM98AQ8NCA5 519 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 BORCS6Q96GS4 357 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 WDR6Q9NNW5 1121 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 MRPS33Q9Y291 106 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 INPPL1O15357 1258 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 SERPINF2P08697 491 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 OCM2P0CE71 109 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 OCMP0CE72 109 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ARP10275 920 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 UQCRBP14927 111 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 EPHB2P29323 1055 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 CAPZA2P47755 286 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 GJA8P48165 433 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 CCINQ13939 588 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 RD3Q7Z3Z2 195 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 BRSK2Q8IWQ3 736 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 RNF10Q8N5U6 811 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 VPS37AQ8NEZ2 397 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 IGDCC4Q8TDY8 1250 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 OSBPL1AQ9BXW6 950 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ATP13A3Q9H7F0 1226 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ARHGEF4Q9NR80 690 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 FOXN1O15353 648 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 VEGFDO43915 354 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ATP4AP20648 1035 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 AGXTP21549 392 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 TERF1P54274 439 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 ZBTB41Q5SVQ8 909 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 FAXCQ5TGI0 409 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 LRRC8EQ6NSJ5 796 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 MYCBPQ99417 103 aaPredicted RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 GTPBP2Q9BX10 602 aaKnown RBP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 WNT8AQ9H1J5 351 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 DNAJC11Q9NVH1 559 aa9.81□□□□□ -0.84
SCAF11-205ENST00000465950 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCAF11-205ENST00000465950 CAPN8A6NHC0 703 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 CCL16O15467 120 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 RTN2O75298 545 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 HPGDP15428 266 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 TNNI3P19429 210 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 TKTL1P51854 596 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 ACTN3Q08043 901 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 UBALD2Q8IYN6 164 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 UBE2E3Q969T4 207 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 MAGOHBQ96A72 148 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 REPS1Q96D71 796 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 HES6Q96HZ4 224 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 PCMTD2Q9NV79 361 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 CLIC4Q9Y696 253 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 SYF2O95926 243 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 OR56A5P0C7T3 313 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 GDI1P31150 447 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 PTENP60484 403 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 SF3B4Q15427 424 aaKnown RBP eCLIP9.8□□□□□ -0.848e-9■■■□□ 16.8
SCAF11-205ENST00000465950 SPDYE7PQ495Y7 208 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 CEP70Q8NHQ1 597 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 HASPINQ8TF76 798 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 TMEM159Q96B96 161 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 TMEM176AQ96HP8 235 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 QRFPRQ96P65 431 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.8□□□□□ -0.842e-7■□□□□ 10.3
SCAF11-205ENST00000465950 C6orf203Q9P0P8 240 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 YKT6O15498 198 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 AP5Z1O43299 807 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 PFKLP17858 780 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 DYNLT1P63172 113 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 CUL2Q13617 745 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 LBRQ14739 615 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 ARMC12Q5T9G4 340 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 C17orf99Q6UX52 265 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 MAFAQ8NHW3 353 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 MCRS1Q96EZ8 462 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 RNPEPQ9H4A4 650 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 LZTFL1Q9NQ48 299 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 TRMT1Q9NXH9 659 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 AIPL1Q9NZN9 384 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 ARHGAP26Q9UNA1 814 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 ATRNL1Q5VV63 1379 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 CCDC66A2RUB6 948 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 NMT1P30419 496 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 SMAD3P84022 425 aaKnown RBP9.8□□□□□ -0.84
SCAF11-205ENST00000465950 SLMAPQ14BN4 828 aa9.8□□□□□ -0.84
SCAF11-205ENST00000465950 RESP18Q5W5W9 173 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms