RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 ATP6V0A2Q9Y487 856 aa3.68□□□□□ -1.82
SNX4-202ENST00000465505 ZNF785A8K8V0 405 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 hCG_1984214I3L0E3 225 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 GABRDO14764 452 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TP73O15350 636 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 SOAT2O75908 522 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 BAG2O95816 211 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 CHEK2O96017 543 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PRR35P0CG20 571 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PCSK6P29122 969 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PRDX5P30044 214 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 FXR1P51114 621 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNX4-202ENST00000465505 ADKP55263 362 aaKnown RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 SH3BGRP55822 239 aaPredicted RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 GSCP56915 257 aaPredicted RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 NUCB1Q02818 461 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 DDX10Q13206 875 aaKnown RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 MTMR1Q13613 665 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PDIA5Q14554 519 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 ODF1Q14990 250 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TNIP1Q15025 636 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TBCCQ15814 346 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TMEM119Q4V9L6 283 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 SLC44A4Q53GD3 710 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PLAC9Q5JTB6 97 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 CCDC122Q5T0U0 273 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 RBM20Q5T481 1227 aaKnown RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 ZNF626Q68DY1 528 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TTC19Q6DKK2 380 aaPredicted RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 SUMO4Q6EEV6 95 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PPP4R4Q6NUP7 873 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PACS1Q6VY07 963 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 SYNE3Q6ZMZ3 975 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 MMS22LQ6ZRQ5 1243 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 BRINP3Q76B58 766 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 MCM10Q7L590 875 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TRIM74Q86UV6 250 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TRIM73Q86UV7 250 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 MORC1Q86VD1 984 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 SNX32Q86XE0 403 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 FAM90A1Q86YD7 464 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 CPXCR1Q8N123 301 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 ZNF713Q8N859 430 aaPredicted RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 PSD4Q8NDX1 1056 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TTC8Q8TAM2 541 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 SPATA18Q8TC71 538 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 BRSK1Q8TDC3 778 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 AFAP1L1Q8TED9 768 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 REPS1Q96D71 796 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 HERPUD2Q9BSE4 406 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 TCHPQ9BT92 498 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 CNPPD1Q9BV87 410 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 PDRG1Q9NUG6 133 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 EXOC1Q9NV70 894 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 C9orf78Q9NZ63 289 aaPredicted RBP3.67□□□□□ -1.82
SNX4-202ENST00000465505 CFAP97Q9P2B7 532 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 MRFAP1Q9Y605 127 aa3.67□□□□□ -1.82
SNX4-202ENST00000465505 DHX29Q7Z478 1369 aaKnown RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 A6NCN8 305 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 LRRC14BA6NHZ5 514 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 H0YHG0 523 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 K7ENM7 598 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 KINO60870 393 aaKnown RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 VPS4BO75351 444 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 ALDH1L1O75891 902 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 GNAI3P08754 354 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 EBLN1P0CF75 366 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 SLC5A1P13866 664 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 CD9P21926 228 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 KELP23276 732 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 PHKA1P46020 1223 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 ZNF135P52742 658 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 CSE1LP55060 971 aaKnown RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 GNAI1P63096 354 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 MCL1Q07820 350 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 TRAF1Q13077 416 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 PDE1CQ14123 709 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 BOP1Q14137 746 aaKnown RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 TTF1Q15361 905 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 PKN2Q16513 984 aaKnown RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 PROSER3Q2NL68 480 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 SLC4A8Q2Y0W8 1093 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 UAP1L1Q3KQV9 507 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 VPS53Q5VIR6 699 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 LMBRD2Q68DH5 695 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 SWSAP1Q6NVH7 229 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 LVRNQ6Q4G3 990 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 UNC5DQ6UXZ4 953 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 RTL10Q7L3V2 364 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 RASGRP2Q7LDG7 609 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 ZNF551Q7Z340 670 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 PPP1R32Q7Z5V6 425 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 PNMA8AQ86V59 439 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 DRAXINQ8NBI3 349 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 IL17REQ8NFR9 667 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 OR8H1Q8NGG4 311 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 ZNF75CPQ92670 426 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 FAM136AQ96C01 138 aa3.66□□□□□ -1.82
SNX4-202ENST00000465505 DHTKD1Q96HY7 919 aaPredicted RBP3.66□□□□□ -1.82
SNX4-202ENST00000465505 FAM81BQ96LP2 452 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms