RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 TKTL1P51854 596 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 NUBP1P53384 320 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 MLLT6P55198 1093 aaPredicted RBP13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 ZXDBP98169 803 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 KRT31Q15323 416 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 CNGA2Q16280 664 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 ANO6Q4KMQ2 910 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 C1orf228Q6PIY5 440 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 RALGPS2Q86X27 583 aaPredicted RBP13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 CPA6Q8N4T0 437 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 AOPEPQ8N6M6 819 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 OSCP1Q8WVF1 389 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 FAM3CQ92520 227 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 SHC3Q92529 594 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 NELL2Q99435 816 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 OSBPL6Q9BZF3 934 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 CYLDQ9NQC7 956 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 HPS4Q9NQG7 708 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 NDRG2Q9UN36 371 aaKnown RBP13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 USP3Q9Y6I4 520 aa13.22□□□□□ -0.29
CNKSR1-203ENST00000465415 SHISA7A6NL88 538 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 BECN2A8MW95 431 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 GALR2O43603 387 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 GNA15P30679 374 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 ADIGQ0VDE8 80 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 RUNX3Q13761 415 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 FKBP15Q5T1M5 1219 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 SCD5Q86SK9 330 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 TADA2BQ86TJ2 420 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 ARHGAP18Q8N392 663 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 PRSS33Q8NF86 280 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 VPS16Q9H269 839 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 ARIH1Q9Y4X5 557 aaPredicted RBP13.21□□□□□ -0.29
CNKSR1-203ENST00000465415 MUC6Q6W4X9 2439 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 SLC9A3R1O14745 358 aaPredicted RBP13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 SCAMP3O14828 347 aaKnown RBP13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 NCAM2O15394 837 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 THAP12O43422 761 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 MED7O43513 233 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 TBX18O95935 607 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 ZBED1O96006 694 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 IRF1P10914 325 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 RALAP11233 206 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 RARGP13631 454 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 ATP5C1P36542 298 aaKnown RBP13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 RGS7P49802 495 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 YWHAGP61981 247 aaKnown RBP eCLIP13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 GOLGA8FQ08AF8 430 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 GOLGA8DPQ0D2H9 430 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 EML3Q32P44 896 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 KIAA1958Q8N8K9 716 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 KCTD13Q8WZ19 329 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 CLIC5Q9NZA1 410 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
CNKSR1-203ENST00000465415 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 SYCE3A1L190 88 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 OTOL1A6NHN0 477 aaPredicted RBP13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 LGALS16A8MUM7 142 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 NFATC1O95644 943 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 LCP1P13796 627 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 ZNF18P17022 549 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 CDK11BP21127 795 aaKnown RBP13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 MAGEA9P43362 315 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 COPB1P53618 953 aaKnown RBP13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 PTPN5P54829 565 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 AMPD2Q01433 879 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 KCNMA1Q12791 1236 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 NCAPHQ15003 741 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 MEA1Q16626 185 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 KLHDC7AQ5VTJ3 777 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 PM20D1Q6GTS8 502 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 PMF1Q6P1K2 205 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 KLHDC10Q6PID8 442 aa13.19□□□□□ -0.3
CNKSR1-203ENST00000465415 TXNDC11Q6PKC3 985 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms