RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 REV3LO60673 3130 aa6.36□□□□□ -1.39
SSBP1-204ENST00000465167 MYO10Q9HD67 2058 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 PHLPP2Q6ZVD8 1323 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 H0Y858 1186 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 CTIFO43310 598 aaKnown RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 SLITRK3O94933 977 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 LYPLA2O95372 231 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 THP07101 528 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 CD3EP07766 207 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 FOSL1P15407 271 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 ARF4P18085 180 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 HOXA11P31270 313 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 ECI1P42126 302 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 RARRES1P49788 294 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 NEK4P51957 841 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 DSG1Q02413 1049 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 MBTD1Q05BQ5 628 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 PRPF4BQ13523 1007 aaKnown RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 CAPSQ13938 189 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 NOLC1Q14978 699 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 PRSS53Q2L4Q9 553 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 DCAF4L1Q3SXM0 396 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 SLC35F1Q5T1Q4 408 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 GET4Q7L5D6 327 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 CEP57Q86XR8 500 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 PALB2Q86YC2 1186 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 PIGOQ8TEQ8 1089 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 RIN2Q8WYP3 895 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 NINJ1Q92982 152 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 C1orf159Q96HA4 380 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 CLUHP3Q96NS8 147 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 FCRL3Q96P31 734 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 NXF3Q9H4D5 531 aaKnown RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 GJB4Q9NTQ9 266 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 FNIP2Q9P278 1114 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 WRAP73Q9P2S5 460 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 ZC3H7BQ9UGR2 993 aaKnown RBP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 HES2Q9Y543 173 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.35□□□□□ -1.39
SSBP1-204ENST00000465167 ZNF318Q5VUA4 2279 aa6.35□□□□□ -1.39
SSBP1-204ENST00000465167 MUC6Q6W4X9 2439 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 BTBD18B2RXH4 712 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TEX28O15482 410 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TRAPPC3O43617 180 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 DNAJC6O75061 913 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 ZNF205O95201 554 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 C1RP00736 705 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 PDGFBP01127 241 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 PRKCBP05771 671 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 OR52Z1P0C646 297 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 MYBP10242 640 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 IFNGR1P15260 489 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 MUTP22033 750 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 GLRA2P23416 452 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 AKAP5P24588 427 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 ARL2P36404 184 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 NAMPTP43490 491 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 MASP1P48740 699 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 EFNA5P52803 228 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 DSC1Q08554 894 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 SPIRE1Q08AE8 756 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TUSC3Q13454 348 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TRIM61Q5EBN2 209 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 PPM1LQ5SGD2 360 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 ZC3H14Q6PJT7 736 aaKnown RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 MTSS1LQ765P7 747 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 FILIP1Q7Z7B0 1213 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 GPR65Q8IYL9 337 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 KRT222Q8N1A0 295 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 KCNG4Q8TDN1 519 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 KIFAP3Q92845 792 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 NKD2Q969F2 451 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TTPALQ9BTX7 342 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 POLR3CQ9BUI4 534 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 VN1R3Q9BXE9 311 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 KCNK12Q9HB15 430 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 WDR6Q9NNW5 1121 aaKnown RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 XPNPEP1Q9NQW7 623 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 TOPORSQ9NS56 1045 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 MARCH5Q9NX47 278 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 PAXBP1Q9Y5B6 917 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 BACE2Q9Y5Z0 518 aa6.34□□□□□ -1.39
SSBP1-204ENST00000465167 ZFP37Q9Y6Q3 630 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-204ENST00000465167 BLACEA4D250 179 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CASTOR2A6NHX0 329 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 SMTNL1A8MU46 457 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 B4GALT5O43286 388 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 B4GALT3O60512 393 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RECQL4O94761 1208 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 CTDNEP1O95476 244 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 SYPP08247 313 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 HNRNPA1P09651 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
SSBP1-204ENST00000465167 SPATA31D3P0C874 917 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 AOC1P19801 751 aa6.33□□□□□ -1.4
SSBP1-204ENST00000465167 RPA1P27694 616 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms