RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TERB1Q8NA31 727 aa15.52■□□□□ 0.08
MCF2L-220ENST00000464800 B3GALNT2Q8NCR0 500 aa15.52■□□□□ 0.08
MCF2L-220ENST00000464800 KIAA1586Q9HCI6 787 aa15.52■□□□□ 0.08
MCF2L-220ENST00000464800 MYH10P35580 1976 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 IGHV1OR15-9A0A0B4J2B8 117 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 A8MXQ7 604 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 CLDN5O00501 218 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 ARHGAP33O14559 1287 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 ZNF217O75362 1048 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 SYPP08247 313 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 FAM163BP0C2L3 166 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
MCF2L-220ENST00000464800 TNNI1P19237 187 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 NTSR1P30989 418 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 TUBP50607 506 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 FAM193AP78312 1265 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 SNRNP35Q16560 246 aaKnown RBP15.51■□□□□ 0.07
MCF2L-220ENST00000464800 WDR72Q3MJ13 1102 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 BBS7Q8IWZ6 715 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 CHCHD4Q8N4Q1 142 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 OR2I1PQ8NGU4 316 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 HSPA12BQ96MM6 686 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 DUSP9Q99956 384 aaKnown RBP15.51■□□□□ 0.07
MCF2L-220ENST00000464800 B3GNT5Q9BYG0 378 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 SPHK2Q9NRA0 654 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 ADAMTS20P59510 1910 aa15.51■□□□□ 0.07
MCF2L-220ENST00000464800 WDFY3Q8IZQ1 3526 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 FAM221BA6H8Z2 402 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 CD59P13987 128 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 WASP42768 502 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 GRAMD4Q6IC98 578 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 RAB44Q7Z6P3 723 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-220ENST00000464800 GLIS3Q8NEA6 775 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 CGRRF1Q99675 332 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 NACA2Q9H009 215 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 CCSER2Q9H7U1 834 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
MCF2L-220ENST00000464800 DNAAF2Q9NVR5 837 aaKnown RBP15.5■□□□□ 0.07
MCF2L-220ENST00000464800 CYP8B1Q9UNU6 501 aa15.5■□□□□ 0.07
MCF2L-220ENST00000464800 DSPP15924 2871 aaKnown RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 ANKRD11Q6UB99 2663 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 A0A087X0B3 334 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 A0A1W2PQD8 194 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 A0A1W2PQF6 199 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 EIF3DO15371 548 aaKnown RBP eCLIP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 CST3P01034 146 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 IRF1P10914 325 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 NDUFV2P19404 249 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SLC5A3P53794 718 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 TRPC3Q13507 836 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 PSMD6Q15008 389 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SNX30Q5VWJ9 437 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 EGFLAMQ63HQ2 1017 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SDE2Q6IQ49 451 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 FAM35AQ86V20 835 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 PROSER1Q86XN7 944 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 TMEM25Q86YD3 366 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 MIB1Q86YT6 1006 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SLC41A1Q8IVJ1 513 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 CHPFQ8IZ52 775 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 TRIML1Q8N9V2 468 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 RDH13Q8NBN7 331 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SCAMP5Q8TAC9 235 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 CCDC127Q96BQ5 260 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 KCNK16Q96T55 309 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 MED10Q9BTT4 135 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 PANK2Q9BZ23 570 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 DMAP1Q9NPF5 467 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 DNAJC17Q9NVM6 304 aaKnown RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 GMIPQ9P107 970 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 SUSD2Q9UGT4 822 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 CHORDC1Q9UHD1 332 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 FASNP49327 2511 aaKnown RBP15.49■□□□□ 0.07
MCF2L-220ENST00000464800 DMXL2Q8TDJ6 3036 aa15.49■□□□□ 0.07
MCF2L-220ENST00000464800 NEDD8-MDP1E9PL57 170 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 NDUFS2O75306 463 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 STAU1O95793 577 aaKnown RBP15.48■□□□□ 0.07
MCF2L-220ENST00000464800 CYP24A1Q07973 514 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 SLC14A1Q13336 389 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 PLEKHG6Q3KR16 790 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 SYCP2LQ5T4T6 812 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 RGL4Q8IZJ4 473 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 PDILTQ8N807 584 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 IPO4Q8TEX9 1081 aaKnown RBP15.48■□□□□ 0.07
MCF2L-220ENST00000464800 SCFD1Q8WVM8 642 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 SYAP1Q96A49 352 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-220ENST00000464800 SMARCD1Q96GM5 515 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
MCF2L-220ENST00000464800 AGPAT3Q9NRZ7 376 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 HCN2Q9UL51 889 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 PCDHB9Q9Y5E1 797 aa15.48■□□□□ 0.07
MCF2L-220ENST00000464800 TAF4O00268 1085 aa15.47■□□□□ 0.07
MCF2L-220ENST00000464800 TRIM24O15164 1050 aa15.47■□□□□ 0.07
MCF2L-220ENST00000464800 CACNG3O60359 315 aa15.47■□□□□ 0.07
MCF2L-220ENST00000464800 CLSTN1O94985 981 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms