RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 MIA3Q5JRA6 1907 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 CHADO15335 359 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 TEX33O43247 280 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 COCHO43405 550 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 TLR5O60602 858 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 GFPT2O94808 682 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 ZDHHC11BP0C7U3 371 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 RARGP13631 454 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 CLCN1P35523 988 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 STAT1P42224 750 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 YWHAGP61981 247 aaKnown RBP eCLIP12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 FANCCQ00597 558 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 FCHO2Q0JRZ9 810 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 MTF1Q14872 753 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 PKDCCQ504Y2 493 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 SNX30Q5VWJ9 437 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 PMF1Q6P1K2 205 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 RSRC2Q7L4I2 434 aaKnown RBP12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 PASD1Q8IV76 773 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 SH3RF2Q8TEC5 729 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 DNASE1L2Q92874 299 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 PBXIP1Q96AQ6 731 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 ASIC4Q96FT7 647 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 NMUR1Q9HB89 426 aa12.65□□□□□ -0.38
RPUSD3-211ENST00000464783 A0A1B0GTH6 734 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 LEFTY2O00292 366 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 EPHB6O15197 1021 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 GPR37L1O60883 481 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 OLFM2O95897 454 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 CYP11B1P15538 503 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SOX5P35711 763 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 GPD2P43304 727 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 ACADSBP45954 432 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 IFNAR2P48551 515 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 PGFP49763 221 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SLC7A9P82251 487 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 USP4Q13107 963 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 ZNF77Q15935 545 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 MEA1Q16626 185 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SLC44A4Q53GD3 710 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 C10orf120Q5SQS8 335 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 TAF3Q5VWG9 929 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 DDX42Q86XP3 938 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 FLCNQ8NFG4 579 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SHDQ96IW2 340 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 HSFY1Q96LI6 401 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 LRRC3BQ96PB8 259 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 NOX5Q96PH1 765 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 MIS12Q9H081 205 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 CYLDQ9NQC7 956 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 HEBP1Q9NRV9 189 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 OSER1Q9NX31 292 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 NUDT5Q9UKK9 219 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
RPUSD3-211ENST00000464783 FBXO21O94952 628 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 IRF1P10914 325 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 KPNA1P52294 538 aaPredicted RBP12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 UBASH3AP57075 661 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 JAM2P57087 298 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 DAOAP59103 153 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 ARID5AQ03989 594 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 PM20D1Q6GTS8 502 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 TPRG1Q6ZUI0 275 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 SCD5Q86SK9 330 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 TTC8Q8TAM2 541 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 RIN3Q8TB24 985 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 RNF139Q8WU17 664 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 NDRG1Q92597 394 aaKnown RBP12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 NAP1L5Q96NT1 182 aaPredicted RBP12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 C11orf16Q9NQ32 467 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 DUS2Q9NX74 493 aaKnown RBP12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 CLIC5Q9NZA1 410 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 RASAL2Q9UJF2 1139 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 WNT6Q9Y6F9 365 aa12.63□□□□□ -0.39
RPUSD3-211ENST00000464783 COL4A3Q01955 1670 aa12.62□□□□□ -0.39
RPUSD3-211ENST00000464783 A0A1W2PQC6 194 aa12.62□□□□□ -0.39
RPUSD3-211ENST00000464783 KRBA1A5PL33 1030 aa12.62□□□□□ -0.39
RPUSD3-211ENST00000464783 YJEFN3A6XGL0 299 aa12.62□□□□□ -0.39
RPUSD3-211ENST00000464783 E7ENQ6 273 aa12.62□□□□□ -0.39
RPUSD3-211ENST00000464783 MDM4O15151 490 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms